KEGG   Sus scrofa (pig): 100153555
Entry
100153555         CDS       T01009                                 
Symbol
GABRR1
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit rho-1
  KO
K05190  gamma-aminobutyric acid receptor subunit rho
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04723  Retrograde endocannabinoid signaling
ssc04727  GABAergic synapse
ssc05032  Morphine addiction
ssc05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100153555 (GABRR1)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100153555 (GABRR1)
   04723 Retrograde endocannabinoid signaling
    100153555 (GABRR1)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    100153555 (GABRR1)
   05033 Nicotine addiction
    100153555 (GABRR1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100153555 (GABRR1)
Ion channels [BR:ssc04040]
 Ligand-gated channels
  GABA-A
   100153555 (GABRR1)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb
Other DBs
NCBI-GeneID: 100153555
NCBI-ProteinID: XP_013848140
Ensembl: ENSSSCG00000004315
UniProt: A0A8D2BLW4 A0A4X1VEA9
Position
1:complement(57222027..57285918)
AA seq 462 aa
MLAVQNMKAGVFLLWWGWVLATESRVHWQKREVPEMSKKGSPILKRSPDITKSPLTKSEQ
LLRIDDHDFSMRPGFGGPAIPVGVDVQVEXLDSISEVDMDFTMTLYLRHYWKDERLSFPS
TNNLSMTFDGRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVQPDGKVLYSLRVTVTAM
CNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKKGNDSLKTDERISLSQFLIQEFHTTT
KLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLG
ITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKER
KPQEKLPCTCGLPQPRAVLLDGSYSDGEVNDLGNYTPDNGDKPDRMMVQLTLASERSSPR
RKSQRSSYVSMRIDTHAIDKYSRIIFPAAYILFNLIYWSIFS
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgttggctgtccagaatatgaaagctggcgttttccttttgtggtggggatgggttttg
gctactgaaagcagagtgcactggcaaaaaagagaggtgccggaaatgtcaaagaaaggc
agcccaattcttaaacgaagcccggatatcaccaaatcgcccctgacgaaatcagaacag
ctcctgaggatagacgaccacgatttcagcatgaggcctggctttggaggcccggccatt
cctgttggtgtggacgtgcaggtggaangcttggacagcatctcagaggtcgacatggac
ttcacgatgaccctgtacctgaggcactactggaaggacgagaggctgtccttcccgagc
accaacaacctcagcatgaccttcgacggccggctggtgaagaagatctgggtccccgac
atgttctttgtgcactccaagcgctccttcatccacgacaccaccacagacaacgtgatg
ctgcgggtgcagcccgatggcaaagtgctctacagcctcagggtcacggtgaccgcaatg
tgcaacatggactttagccgatttccactggacacacaaacgtgctcgcttgaaattgag
agctatgcctacacagaagatgacctcatgctgtactggaagaaaggcaatgactcctta
aagacagatgagcggatctcactctcccagttcctcatccaagagttccacaccaccacc
aaactggccttctacagcagcacaggctggtacaaccgtctgtacattaacttcacactg
cgtcgccacatcttcttcttcttgctccaaacctactttcctgccaccctgatggtcatg
ctgtcctgggtgtccttctggatcgaccgcagagccgtgcctgctagagtccctttaggg
atcaccacggtgctgaccatgtccaccatcatcacgggcgtgaacgcctccatgccccgc
gtgtcctacatcaaggccgtggacatctacctctgggtcagcttcgtgttcgtgttcctc
tcggtgctggagtacgcggccgtcaactacctgaccaccgtgcaggagcggaaggagcgg
aagccgcaggagaagctgccctgcacctgcggattgcctcagccgcgtgcagtcctgctg
gacggcagctacagtgacggggaggtgaacgacctgggcaactacacgcctgacaatgga
gacaagcccgacaggatgatggtgcagctgactctggcctcagagaggagctccccccgg
aggaagagccagaggagcagctacgtgagcatgcggattgatacccacgccattgataaa
tactcgaggatcatttttccagccgcatacatcttattcaatttaatatactggtcgatt
ttctcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system