KEGG   Sus scrofa (pig): 100153932
Entry
100153932         CDS       T01009                                 
Symbol
FDPS
Name
(RefSeq) farnesyl pyrophosphate synthase precursor
  KO
K00787  farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc00900  Terpenoid backbone biosynthesis
ssc01100  Metabolic pathways
ssc05164  Influenza A
ssc05166  Human T-cell leukemia virus 1 infection
Module
ssc_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    100153932 (FDPS)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100153932 (FDPS)
   05164 Influenza A
    100153932 (FDPS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ssc01006]
    100153932 (FDPS)
Enzymes [BR:ssc01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     100153932 (FDPS)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     100153932 (FDPS)
Prenyltransferases [BR:ssc01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   100153932 (FDPS)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 100153932
NCBI-ProteinID: NP_001172060
Ensembl: ENSSSCG00000006512
UniProt: D0G6X4 A0A8D1M691
Position
4:complement(94500140..94514820)
AA seq 421 aa
MLPLSRWLRSVGLFLLPAPCWVPRERWLGPLRRPSLVHGCPVLGAWHSARCWCQAWTEEP
RAFYSSLRMNGDQKLDAYARERQDFIQHFSQIVKVLTEEDIGHPEIGDAVARLKEVLEYN
VVGGKYNRGITVLVVFRELVEPRKQDADSLQRALTVGWCIELLQAFFLVADDIEDSSLTR
RGQTCWYRKPGIGLDAINDAFLLEACIYRLLKFYCREQPYYLNLIELFLQTSYNTEIGQT
LDLIAGPQGNVDLSRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHANAKKIL
MEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRASPEQRQILQENYGQ
KDAEKVARVKALYEEMNLQAVFLQYEEDSYSHLMGLIEQYAAPLPPAIFLELAHKIYKRR
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgctgcccctgtcccgctggctgagatctgtggggctcttcttgctgccagccccctgc
tgggtgccccgggagaggtggctgggtcccctacggcggccctccctggtgcacgggtgc
ccagtcctgggggcatggcacagtgctcgctgctggtgccaagcgtggacagaggagcct
cgagcattttactcctccctcagaatgaacggagaccagaaattggacgcttatgcccga
gaaaggcaggatttcatccagcacttctcccagatcgtcaaggtgctgactgaggaggac
atcgggcacccagagataggagatgctgttgcccgactcaaggaggttctggagtacaat
gttgtcggaggcaagtacaaccgaggtatcacggtgctggtggtgttccgggagctggtg
gagcccaggaagcaggatgctgatagtctccagcgggccctgaccgtgggctggtgtatt
gaactgctccaagccttcttcctggtggcagacgacatcgaggactcctccctcacccgc
cggggccagacctgctggtatcggaagccaggtataggtttggatgccatcaatgatgct
ttccttctggaagcttgtatctaccgcctgctgaagttctactgccgggagcagccctat
tacctgaacctgattgagctcttcttgcagacttcctacaacactgagatcggacagacc
ctggacctcatcgccggcccccagggcaacgtggatcttagcaggttcactgaaaagagg
tacaagtctattgtcaagtacaagacagctttctactctttctacctgcccgtggctgct
gccatgtatatggcaggcattgacggggagaaggagcacgccaatgccaagaagatcctg
atggagatgggagagttctttcagattcaggacgattacctcgacctctttggggacccc
agcgtgacaggcaagatcggcacagacatccaggacaacaagtgcagctggctggtggtt
cagtgtctgcagcgggcctctccggagcagcgccaaatcctgcaggagaactatgggcag
aaggatgctgagaaggtggcccgggtgaaggcgctgtatgaggagatgaatctgcaggca
gtgttcctgcagtacgaggaagacagttacagccacctgatgggtctcatcgagcagtat
gctgcgcccctgcccccggccatcttcctggagctggcacacaagatctacaagagaaga
aagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (19)   
   RefSeq(nuc) (5)   
   GenBank (7)   
   EMBL (7)   
Protein domain (1)   
   Pfam (1)   
All databases (63)   

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