KEGG   Sus scrofa (pig): 100154191
Entry
100154191         CDS       T01009                                 
Symbol
TRIM8
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIM8
  KO
K12001  tripartite motif-containing protein 8 [EC:2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100154191 (TRIM8)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100154191 (TRIM8)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100154191 (TRIM8)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-B_box zf-RING_10 zf-RING_5 CASP_C zf-Nse dCache_2
Other DBs
NCBI-GeneID: 100154191
NCBI-ProteinID: XP_001928939
Ensembl: ENSSSCG00000010587
Vega: OTTSUSG00000002774
UniProt: F1S855 A0A4X1TU70
Position
14:113637437..113652577
AA seq 551 aa
MAENWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCIGEAWAKDSGLVRCPECNQAYN
QKPGLEKNLKLTNIVEKFNALHVEKPPAALHCVFCRRGPPLPAQKVCLRCEAPCCQSHVQ
THLQQPSTARGHLLVEADDVRAWSCPQHNAYRLYHCEAEQVAVCQYCCYYSGAHQGHSVC
DVEIRRNEIRKMLMKQQDRLEEREQDIEDQLYKLESDKRLVEEKVSQLKEEVRLQYEKLH
QLLDEDLRQTVEVLDKAQAKFCSENAAQALHLGERMQEAKKLLGSLQLLFDKTEDVSFMK
NTKSVKILMDRTQTCTGSSLSPPKIGHLNSKLFLNEVAKKEKQLRKMLEGPFSTPVPFLQ
SVPLYPCGVSSSGAEKRKHSTAFPEASFLETSSGPVGGQYGAAGTASGEGQSGQPLGPCS
STQHLVALPGGAQPVHSSPVFPPSQYPNGSAAQQPMLPQYGGRKILVCSVDNCYCSSVAN
HGGHQPYPRSGHFPWTVPSQEYSHPLPPTPSVPQSLPGLAVRDWLDASQQPGHQDFYRVY
GQPSTKHYVTS
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggcggagaattggaagaactgcttcgaggaggagctcatttgccccatctgcctgcat
gtcttcgtggagccggtgcaattgccgtgcaaacacaacttctgtcggggctgcattggc
gaggcgtgggccaaggacagcggcctggtgcgctgccccgagtgcaaccaggcttacaac
cagaagcccggcctggagaagaacctgaagctcactaacatcgtggagaagttcaacgcc
ctgcacgtggagaagccgcccgcggcgctgcactgcgtgttctgccgccgcggccccccg
ctgcccgcgcagaaggtctgcctgcgctgcgaggcgccctgctgccagtcccacgtgcag
acgcacctgcagcagccctctaccgcccgcgggcacctcctggtggaggcggacgacgtg
cgggcctggagctgcccgcaacacaacgcctaccgcctttaccactgcgaggccgagcag
gtggcggtgtgccagtactgctgctactacagcggtgcgcatcagggacattcggtgtgc
gacgtggagatccgaaggaatgagatccggaagatgctgatgaagcagcaggaccggctg
gaggagcgagagcaggacattgaggaccagctatacaagctcgagtcagacaagcgcctg
gtggaggagaaggtgagccagctgaaggaggaagtgcggctgcagtacgagaagctgcac
cagctgctggacgaggacctgcggcagacagtggaggtcctggacaaggcccaggccaag
ttctgcagcgagaacgcagcgcaggcgctgcacctcggggagcgcatgcaggaggccaag
aagctgctgggctccctgcagctgctctttgacaagacggaggatgtcagcttcatgaag
aacaccaagtctgtgaaaatcctaatggacaggacccagacctgcacaggcagcagcctt
tctccccctaagatcggccacctgaactccaagctcttcctgaacgaggtggccaagaag
gagaagcagctgcggaagatgctagaaggccccttcagcacaccggtgcccttcctgcag
agcgtccccctgtacccttgtggcgtgagcagctcaggggcggagaagcgcaagcactcg
acggccttccctgaggccagtttcctagagacgtcgtcgggccctgtgggcggccagtat
ggggcagcgggcacggccagcggcgagggccagtcagggcagcccctgggcccctgcagc
tccacgcagcacttggtggccctgccgggcggcgcccaaccagtgcactcaagtcctgtg
ttccccccatcgcagtaccccaatggctccgccgcccagcagcccatgctcccccagtat
ggcggccgcaagattctcgtctgttctgtggacaactgttactgttcttccgtggccaac
cacggtggccaccagccctacccccgctccggccacttcccctggacagtgccctcgcag
gagtactcacacccgctcccgcccacaccctccgtcccccagtcccttcccggcctggcg
gtcagagactggctcgacgcctcccagcagcctggccaccaggatttctacagggtgtat
gggcagccgtccaccaaacactacgtgacgagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (43)   

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