KEGG   Sus scrofa (pig): 100154314
Entry
100154314         CDS       T01009                                 
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
  KO
K15710  E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.- 2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100154314 (SHPRH)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100154314 (SHPRH)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100154314 (SHPRH)
SSDB
Motif
Pfam: SNF2-rel_dom SHPRH_helical-1st SHPRH_helical-2nd Linker_histone Helicase_C zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 PHD zf-RING_2 zf-RING_5 TPR_12 TPR_10
Other DBs
NCBI-GeneID: 100154314
NCBI-ProteinID: XP_001924825
Ensembl: ENSSSCG00000004120
UniProt: A0A480LYB7 A0A4X1VRK7
Position
1:19612915..19697444
AA seq 1685 aa
MSSRRKRAPPVKVDEEKQQQLCWNMHEDRRNEPLTLTDDEQSCPGLDSSSAPCIILDDSL
KEELAHRDKKRCLEAVSISKSIDKEETGGISSPLSVKLNIVISPYHLDNSWKALLGELTL
QLLPEQSLMENFSERSFTLVSSELSNQFLIYVHSECKDIEKQERGLSEPISMCDKGIQVE
SSFSGEMLEDLGWLQKKKRIKLYQKAEGNHIIKVGIYLLEGGLAKLDFLSDANSRMKKFN
QLMKRVMEKLYSFIIPDVLEEDEEDSESEPEGQDIDELYHFVKQTHQQETQSIHVDVQHP
ALTPVLRPYQREAVNWMLQQEHFRSAPASENALHFLWREIVTSEGLKLYYNPYTGCIIRE
YPNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSQYSG
ENVKNTETQHMEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQR
NRSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDIYDKTKKQAVGSPRKIQKES
RKSGNKDTDSEYLPSNTSDDDDDPYYYYYKPRKNRSKLRKKPAPSTKKEKSQLNVDLSSQ
DHCPAPGDSGITDVTTSESTCVFEVKQEQAAKDQVESVTPAGGDIPHSNVMSPNNSSGYR
FECICGELDQADCKPRVQCLKCQLWQHAKCVNYEEKNLKIKPFYCPHCLVAMEPVSTRAT
LIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSE
LNYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPAVKAAEMAQRL
SGINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQPLYSFIAK
ILWRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALK
LSSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEE
AHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKEKLKTDSLQRLHATHNLMEL
LMAKHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALLPVQQTIRDLQRKIYSN
SPWWLNVIHRAIEFGIEEELVQRVRNEITSNYKQQTGKLSMSEKFHDCRGLQFLLTTQME
ELSKFQKQVREAVKNLEGPPSRHVIESATICHLRPARLPLNCCVFCKADELFTEYESKLF
SHTVKGQTAIFEEMIEDEEGLVDDRIPTTSRGLWAVSETERSMKALLSFAKSHRFDIEFI
DEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLH
IIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGVNPEPCPICARQ
LGKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSEKASQ
EEDIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQI
SRVKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRV
HRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTNPSAKHSEASVLTVADLADLFTKE
TEDLE
NT seq 5058 nt   +upstreamnt  +downstreamnt
atgagtagccgacggaaacgtgctcctccagtaaaggtggatgaagaaaagcagcagcag
ctttgttggaatatgcatgaggacagaaggaatgaacctctcaccttaactgatgatgag
cagtcctgcccaggtctggactcctcttctgctccttgcatcatactagatgatagtcta
aaggaagaattggctcacagagataagaagaggtgtttagaggcagtgagcatctcaaaa
tcaattgataaagaagagactggtggcatttcttcccctttgtctgtaaagctgaatatt
gtgatttctccctatcacttggataattcttggaaagcacttctaggagaattaactctt
cagcttcttcctgaacagagtttaatggaaaatttttctgaaaggagttttacactggtg
agttcagagttaagcaatcagttcctgatttatgttcattcagaatgcaaagacatagag
aaacaagaaagaggactcagtgagccaatcagtatgtgtgacaaaggtattcaagtggaa
tcatccttcagtggtgaaatgttagaagatttggggtggctgcaaaagaagaaaagaata
aaactttaccaaaaagcagaaggaaatcacattatcaaggttggaatttatcttttggaa
ggtggcctagcgaaactagattttctgagtgatgcaaattccagaatgaaaaagttcaat
caactcatgaaaagagtgatggaaaagttatacagttttattattccagatgtgctggaa
gaagatgaggaagattcagagagtgagcccgagggacaggacattgatgagctctatcac
tttgtgaagcaaacacatcagcaagaaactcaatccattcacgtggatgtccagcatcct
gcactgactcctgtgttgagaccataccaaagagaggctgtcaattggatgctacaacaa
gagcatttcagaagtgctcctgctagtgaaaatgccctgcactttctatggcgagagatt
gtaacatctgagggtttgaaactctactacaatccatatacaggctgcatcattcgtgag
tacccaaatgctgggccacagttgcttggtggaatcttagcagatgagatgggtctcgga
aagacagtggaggttttggctcttattctgacacatactcgacaagatgtcaaacaagat
gctctcactctgcctgaggggaaagtggtgaattatttcattccatcacagtattctgga
gaaaatgtaaaaaacacagaaacccagcatatggaatttgaaccaaaagaaaaagttcaa
tgcccccccacacgtgtgatgatcctgacagctgtaaaagaaatgaatggaaaaaaagga
gtttccattctttccatctataagtatgtcagttctatatatagatatgatgttcagcgg
aacaggagtcttctgaaacggatgctgaaatgtttaatttttgaaggtcttgtgaaacag
atcaaaggccatggtttttctggtacttttacattgggaaagaattacaaggaagaggat
atatatgataaaacaaaaaagcaggcagtggggagtccaaggaaaattcagaaagaatcc
agaaaatcagggaacaaggacacagattctgaatacttgccatcaaatacctctgatgat
gatgatgatccttactattattactacaagcccaggaaaaatcgtagtaaactgaggaaa
aaacctgctccctccacaaaaaaggaaaaaagtcagcttaatgtcgatctcagctcacaa
gatcattgtccagctcctggtgactctggaattactgatgttaccacatctgaaagtaca
tgtgtctttgaagtcaagcaagagcaggcagcaaaggaccaagttgaatctgtaactcct
gctggtggtgacataccacattctaatgtcatgagtcccaataattcttctggctatcgc
tttgagtgcatatgtggtgaacttgaccaggcagactgtaagcctcgtgttcagtgcctg
aaatgccagttgtggcaacatgcaaaatgtgtgaattatgaagagaagaatctgaagatt
aaacctttctactgcccccactgccttgtagcgatggagccagtatcaacaagagcaact
ctgattatctctcccagttccatctgtcatcagtgggtggatgagatcaacaggcatgtg
aggtcatcatctcttcgagtcttggtatatcaaggagtgaagaaagatggctttttgcag
cctcattttttggccgaacaggacatagtcatcattacttatgatgtcctgcgttcagaa
ctaaactatgtagatattccacacagcaatagtgaggatgggcgtcgcttaaggaaccag
aagcgctatatggccattcccagccccctagtagctgtggagtggtggaggatctgcctt
gatgaagctcagatggttgaatgccctgctgtaaaagctgcagaaatggctcagcgcttg
agtgggattaaccgctggtgcatcagtggcactccagtacagagaggattggaggatctt
tttgggttagtggtctttcttggtattgaaccttactgtgtcaaacactggtgggttcga
cttctctatcgtccttactgcaagaagaatcctcagcccctctacagctttattgccaag
atactgtggaggtctgcaaagaaagatgtgattgaccaaatccagatacccccccagaca
gaagaaatccactggctccacttttctccagtggaaagacatttctatcaccgtcaacat
gaagtatgctgccaggatgcagtagtaaaactcagaaagatttctgactgggctctcaag
ctcagcagcctggacagaaggactgtcacctccatcctgtatccattgctgaggctcagg
caggcctgctgccacccacaggctgttcgaggggagttcttgccactccaaaaaagcact
atgaccatggaagaactgctgacatctctgcagaaaaaatgtggaactgagtgtgaagaa
gcacatcggcaactagtttgtgctctcaatggcttagcaggcatccacatcattaaaggt
gaatatgccttggcagcagaactgtacagagaagtgttgcgttcatctgaggaacacaag
gaaaaactcaaaactgattcactgcaaaggcttcatgctacacataacttgatggaactg
ttgatggccaagcacccagggatacctcctaccctgagagatggcaggcttgaggaagag
gccaaacaactgcgagagcattatatgagcaagtgcaatacagaggttgctgaagcacag
caagctttgctgcctgtgcagcagaccatacgtgatctccagagaaagatttattctaat
tctccttggtggctgaatgtgatccacagagcaatagaatttggtattgaagaggagctt
gttcaaagagtgcgaaatgaaataaccagcaactacaagcaacaaactggcaagctttct
atgtcagagaagttccatgactgcagaggtcttcagttcttacttacaacacaaatggaa
gaactaagtaagttccagaagcaagtaagagaggctgtaaaaaatctggagggacctcca
tctcgtcatgttattgaatctgcaacaatctgccatctccgaccagccagacttcctctc
aactgctgtgtcttttgtaaggctgatgaattgttcacagagtacgaatcaaagctgttt
tctcacacagtcaaaggccagacggcaatatttgaggagatgatagaagatgaagaaggg
ctggtggatgatcgaatacctaccactagtcgcggcctgtgggcagtaagtgagacagag
cggtccatgaaagctctgctgtcatttgcaaagtcacatagatttgatattgaattcatt
gatgaaggaagtacttcaatggatctctttgaagcttggaagaaggaatataagttgctt
catgaatattggatggctctgaggaatcgtgtgtctgctgttgatgaacttgcaatggct
acagaacgactaagagtacgcgatcccagggagccaaagcccaatccaccggttcttcat
atcattgaaccacatgaggtagaacagaatcgtataaaactactaaatgataaagctgtt
gctacatcacagcttcagaaaaaacttggacagcttctttacctaactaacttggagaag
tctcaagacaaaacatcaggaggtgtcaatccagaaccttgtccaatctgtgctcggcag
ctaggcaaacagtgggcagtactaacctgtggtcactgtttctgtaatgaatgcatttca
attattatcgaacaatacagcgtggggtcccacaggagctccattaaatgtgccatctgc
cgccagaccacatctcacaaagaaatctcgtatgtcttcacctcagagaaagccagccag
gaagaggacattcctgtgaagggcagccattctacaaaagtggaagccgtggtcagaact
ctgatgagaatccagctgagagatccaggggccaaagcacttgttttctcaacgtggcaa
gacgtattagacattatttcaaaagctctcactgacaacaacatggaatttgcacaaatc
agtcgtgttaagacatttcaggagaacctttcagcatttaaacatgatccccaaatcaat
attttgctgctgcccctgcacacaggttctaatggattaactatcatcgaagcaactcat
gttcttttggtggagcccatattgaaccctgcccatgagcttcaggccataggaagggtg
caccggattggacagacaaaacctactattgtacacagattcttaattaaagcaacaata
gaagaaagaatgcaagcaatgttgaaaactgctgagagaagtcacaccaacccatcggca
aagcattcagaggcctccgtcttgaccgtggctgatctggcagacctatttaccaaagaa
actgaggaccttgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (62)   

Download RDF
DBGET integrated database retrieval system