KEGG   Sus scrofa (pig): 100154598
Entry
100154598         CDS       T01009                                 
Symbol
LAMP2
Name
(RefSeq) lysosome-associated membrane glycoprotein 2 isoform 1 precursor
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04140  Autophagy - animal
ssc04142  Lysosome
ssc04145  Phagosome
ssc05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100154598 (LAMP2)
   04142 Lysosome
    100154598 (LAMP2)
   04140 Autophagy - animal
    100154598 (LAMP2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    100154598 (LAMP2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100154598 (LAMP2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100154598 (LAMP2)
   04090 CD molecules [BR:ssc04090]
    100154598 (LAMP2)
Membrane trafficking [BR:ssc04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    100154598 (LAMP2)
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    100154598 (LAMP2)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   100154598 (LAMP2)
CD molecules [BR:ssc04090]
 Proteins
  100154598 (LAMP2)
SSDB
Motif
Pfam: Lamp Lamp2_2nd VAS1_LD
Other DBs
NCBI-GeneID: 100154598
NCBI-ProteinID: NP_001231184
Ensembl: ENSSSCG00000012604
Vega: OTTSUSG00000004834
UniProt: A0A287B836 A0A4X1W6B1
Position
X:complement(98586718..98623939)
AA seq 411 aa
MVCFRLSPVPGSGLLMLCLVLGAVSSYALELNLTNSEKATCLYAKWQMNFTIRYETTNNS
HKTVSISDFGAATYNGSFCGDDHNDPQIVMQFGSGFSWIVNFAKESSSYLINSISFSYNT
SDTTTFPDAKKKGVLTVNDSVGFQVPLNDIFRCNSLSTLEKDNVVQHYWDVHVQAFVQNG
TVSTKEFLCDKDKTLTTTVPVIPTSVPSPTTTPTPKEKPETGSYSVTSSNGTCLLANMGL
QLNITQDKVASVININPNTTNATGNCHSKTALLRLSGSNIKYLDFVFAVKNDNRFYLKEV
NVSVYLVNGSVFSIANNNLSYWDAPLGSSYMCNKEQTVSVSGAFQINTFNLRVQPFSVME
GKYSTAQDCSADDDNFIVPIAVGAALAGVLILVLLAYFIGLKRHHAGYEQF
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggtgtgcttccgcctctccccggttccgggctccgggctccttatgctctgcctcgtc
ctgggagctgtctcgtcttatgcattggaacttaatttgacaaattcagaaaaagccact
tgcctttatgcaaagtggcagatgaatttcacaatacgctatgagactacaaacaacagt
cataaaactgtatccatttcagactttggtgctgcaacgtacaatggaagcttttgtggg
gatgaccataacgatccccaaattgtgatgcagtttggatcgggtttttcctggattgtg
aattttgcaaaggaatcgtctagttatttaatcaacagcatctcattttcctacaacact
agtgataccacaacatttcctgatgctaaaaaaaaaggagttttaactgtgaatgactct
gtgggattccaagttccattgaatgacatctttagatgcaatagtttatcaactttagaa
aaggataatgttgtccagcattattgggatgttcatgtacaagcttttgttcaaaacggc
acagtgagcacaaaagagtttttgtgtgataaagataagactttaactacaacggtgccc
gtcattcccacctctgtgccatctcctactacaacacccactccaaaggaaaaaccggag
actggatcctattcagttacaagtagcaatggtacatgtcttctggcaaacatggggctg
caactgaacattactcaagataaggttgcttcagttattaatatcaatcccaacacaacc
aacgccactggcaactgccatagtaaaactgctctactcaggctgagcggcagcaacatc
aaatatcttgacttcgtctttgctgtgaaaaacgacaaccgattctatctgaaggaggtg
aatgtcagcgtgtatttggttaatggttctgttttcagcattgcgaataacaatctcagc
tactgggatgcccccctgggaagttcttatatgtgtaacaaagagcagactgtttcagtg
tctggagcatttcagataaatacctttaatctaagagttcagcccttcagtgtgatggaa
ggaaagtattcaacagctcaagactgcagtgcagatgacgacaacttcattgtgcccata
gcggtgggagcagccttggcaggagtgcttattctagtgttgctggcttactttattggt
ctcaagcgccatcatgctggatatgagcaattttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (20)   
   RefSeq(nuc) (2)   
   GenBank (9)   
   EMBL (9)   
Protein domain (3)   
   Pfam (3)   
All databases (46)   

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