KEGG   Sus scrofa (pig): 100155138
Entry
100155138         CDS       T01009                                 
Name
(RefSeq) tubulin alpha-3 chain isoform X2
  KO
K07374  tubulin alpha
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04145  Phagosome
ssc04210  Apoptosis
ssc04530  Tight junction
ssc04540  Gap junction
ssc04814  Motor proteins
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100155138
  09143 Cell growth and death
   04210 Apoptosis
    100155138
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100155138
   04540 Gap junction
    100155138
  09142 Cell motility
   04814 Motor proteins
    100155138
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100155138
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100155138
   05012 Parkinson disease
    100155138
   05014 Amyotrophic lateral sclerosis
    100155138
   05016 Huntington disease
    100155138
   05020 Prion disease
    100155138
   05022 Pathways of neurodegeneration - multiple diseases
    100155138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100155138
   03036 Chromosome and associated proteins [BR:ssc03036]
    100155138
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    100155138
   04147 Exosome [BR:ssc04147]
    100155138
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100155138
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100155138
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100155138
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100155138
  Exosomal proteins of other body fluids (saliva and urine)
   100155138
  Exosomal proteins of colorectal cancer cells
   100155138
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100155138
NCBI-ProteinID: XP_013836898
Ensembl: ENSSSCG00000010103
UniProt: A0A8D0MRN3 A0A480KVX2
Position
14:50646616..50657344
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgcgagtgcatctctatccacgtggggcaggcaggggttcagatcggcaatgcctgc
tgggagctgtactgccttgaacatggaattcagcccgatggtcagatgcccagtgacaaa
accatcggcggtggggacgactcgttcaacacgttcttcagtgagactggggccggcaag
cacgtgcccagagctgtgtttgtggacctggagcccaccgtggttgatgaagtgcgcacg
gggacctacaggcagctcttccacccggagcagctgatcaccgggaaggaagacgcagcc
aacaattacgccagaggccactacaccatcggcaaggagattgtcgacctggtgctggat
cggatccgcaaactggcggacctgtgcacggggctgcagggcttcctcatcttccacagc
tttgggggcggcaccggctcgggcttcgcatctctgctcatggagcggctctcggtggac
tacggcaagaagtccaagctggagttcgccatttacccggccccccaggtctccacggcc
gtggtggagccctacaactccatcctgaccacgcacacgaccctggagcactcggactgc
gccttcatggtggacaacgaggccatctacgacatctgtcggcgcaacctggacatcgag
cggcccacctacaccaacctcaatcgtctgatcgggcagatcgtgtcctccatcacagcc
tccctgcgcttcgacggggccctcaacgtggacctgacggagttccagaccaacctggtc
ccctacccccgcatccacttccccctggccacctacgccccggtcatctcggccgagaag
gcctaccacgagcagctgtctgtggccgagatcaccaacgcctgcttcgagccggccaac
cagatggtcaagtgtgaccctcgccacggcaagtacatggcctgctgcatgctgtacagg
ggagacgtggtccccaaagacgtcaacgcggccatcgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgcccgactgggttcaaggtaggcatcaactaccagcccccc
acggtggtcccagggggagacctggccaaggtgcagcgggccgtgtgcatgctgagcaac
accacggccatcgccgaggcctgggcccgcctggaccacaagttcgacctcatgtatgcc
aagcgtgccttcgtgcactggtacgtgggggaaggcatggaagagggcgagttctcggag
gccagggaggacctggcggctctggagaaagattacgaagaggtgggcgtggactcggta
gaagcagaggctgaggagggggaggagtactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (1599)   
   KEGG ORTHOLOGY (1)   
   RefGene (1594)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (1626)   

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