KEGG   Sus scrofa (pig): 100155342
Entry
100155342         CDS       T01009                                 
Symbol
USP5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X3
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    100155342 (USP5)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100155342 (USP5)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100155342 (USP5)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100155342 (USP5)
Peptidases and inhibitors [BR:ssc01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   100155342 (USP5)
Ubiquitin system [BR:ssc04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100155342 (USP5)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100155342 (USP5)
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 UBA_4 UBA_3
Other DBs
NCBI-GeneID: 100155342
NCBI-ProteinID: XP_001925819
Ensembl: ENSSSCG00000000684
UniProt: A0A480J4Z3
Position
5:complement(63843742..63858835)
AA seq 835 aa
MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFSKQYVER
HFNKTGQRVYLHLRRTRRPKEEDTTAGTGDPPRKKPTRLAIGIEGGFDLSEKKFDYDEDV
KIVILPDYLEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSRHA
FNLKQLDNPARIPPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHFKET
GYPLAVKLGTITPDGADVYSYDEDDMVLDPNLAEHLSHFGIDMLKMQKTDKTMTELEIDM
NQRIGEWELIQESGVPLKPLFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEK
IFQNAPTDPTQDFSTQVAKLGHGLLSGEYSKPAPESGDGEQVPEQKEVQDGIAPRMFKAL
ISKGHPEFSTNRQQDAQEFFLHLINMVERNCRSSENPNEVFRFLVEEKIKCLATEKVKYT
QRVDYIMQLPVPMDAALNKEELLEYEEKKRQAEEEKLPLPELVRAQVPFSSCLEAYGAPE
QVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIEMPEELDIS
QLRGTGLQPGEEELPDIAPPLVTPDEPKAPMLDESVIIQLVEMGFPMDACRKAVYYTGNS
GAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAADPPPEDCVTTIVSMGFSRDQALK
ALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESIPVGPKVRDGPGKYQL
FAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQRVAS
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggcggagctgagtgaggaggcgctgctgtcagtattaccgacgatccgggtccccaag
gctggagaccgggtccacaaagacgaatgcgccttctccttcgacacaccggagtctgag
ggtggcctctacatctgcatgaacacattcctgggcttcagcaaacagtatgtggagaga
cacttcaacaagacaggccagcgagtctacctacacctccggcggacccggcgcccgaaa
gaggaagacacgaccgcaggcactggagacccgccccggaagaagcccacccggctggct
atcgggatcgaaggcgggtttgacctcagcgagaagaagtttgactatgatgaggatgta
aaaatcgtcattttgccagattacctggagatcgcccgggacgggctggggggactgcct
gacatcgtcagagatcgggtgaccagtgcagtggaggccctgctgtcggctgactcggcc
tcccgcaagcaggaggtgcaggcctgggatggggaggtacggcaggtgtctaggcatgcc
ttcaacctcaagcagctggacaaccctgctcgaatccctccctgtggctggaagtgttcc
aagtgtgacatgcgggagaacctgtggctcaacctgacagacggctccatcctctgtggc
cggcgctacttcgatggcagcgggggcaacaaccacgcagtggagcacttcaaggagacg
ggctacccattagccgtcaagctgggcaccatcacacctgacggcgctgacgtgtattca
tatgacgaggatgacatggtcctggaccccaacctggccgagcacctgtcccacttcggt
atcgacatgctgaagatgcagaagacggacaagacgatgacggagctggagatagacatg
aaccagcgcatcggcgagtgggagctgatccaggagtcaggggtgccgctcaagcccctg
ttcgggcctggctacacgggcatccgcaacctgggcaacagctgctacctcaactccgtg
gtccaggtgctcttcagcatccccgacttccagaggaagtatgtggataagctggaaaag
atcttccagaatgctccgacggaccctacccaggacttcagcacccaggtggccaagctg
ggccatggccttctctcgggagagtattccaagccagcgccagagtcgggcgacggcgag
caggtgccagagcaaaaggaagtccaagatggcattgcccctcggatgttcaaggccctc
atcagcaagggtcaccccgagttctccaccaaccggcagcaggatgcccaagagttcttc
cttcaccttatcaacatggtggagaggaattgccggagctctgaaaatcccaacgaggtg
ttccgcttcctggtggaggagaagatcaagtgcctggccacagagaaggtcaagtacacc
cagcgcgtggactatatcatgcagctgcctgtgcccatggacgcggccctgaacaaagag
gagctcctggagtatgaagagaagaagcggcaagccgaggaggagaagctgccactgcca
gaactggttcgggcacaggtgcccttcagctcctgcctggaggcctatggggcccctgag
caggtggatgacttctggagcactgccctgcaggccaagtccgtggccgtcaagaccaca
cgatttgcctcattccccgactacctggtcatccagatcaagaagttcaccttcggctta
gactgggtgcccaagaaactggatgtgtccatcgagatgcccgaggagctagacatctcc
cagctgaggggcacagggctgcagcctggagaggaggagctgcccgacattgccccaccc
ctggtcactccggatgagcccaaagcgcccatgttggatgaatcggttatcatccagctg
gtggagatgggcttcccgatggacgcctgccgcaaagccgtctactacacgggcaacagc
ggggccgaggccgccatgaactgggtcatgtcgcacatggacgatccagatttcgcgaac
cctctcatcctgcctggctccagcgggcccggctccacaagcgcagcagctgacccccca
ccagaggactgcgtgaccaccattgtctccatgggcttctcccgggaccaggccctgaaa
gctctgcgggccacgaacaatagtttagaacgggctgtggactggatcttcagtcacatt
gatgacctggacgcagaggctgccatggacatctcggagggccgctccgctgccgactcc
atctccgagtccataccagtgggacctaaagtccgggatggtcctggaaagtatcagctc
ttcgccttcattagtcacatgggcacgtcaaccatgtgtggtcactatgtctgccacatc
aagaaggaaggcagatgggtgatctacaacgaccagaaagtgtgtgcctctgagaagccg
cccaaggacctgggctacatctacttctaccagagagtggccagctaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (49)   

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