KEGG   Sus scrofa (pig): 100155390
Entry
100155390         CDS       T01009                                 
Symbol
SNX5
Name
(RefSeq) sorting nexin-5 isoform X3
  KO
K17920  sorting nexin-5/6/32
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100155390 (SNX5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100155390 (SNX5)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ssc04990]
    100155390 (SNX5)
Membrane trafficking [BR:ssc04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    100155390 (SNX5)
Domain-containing proteins not elsewhere classified [BR:ssc04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   100155390 (SNX5)
SSDB
Motif
Pfam: Vps5 PX FAN1_HTH IpaC_SipC BLYB
Other DBs
NCBI-GeneID: 100155390
NCBI-ProteinID: XP_013840551
Ensembl: ENSSSCG00000007088
UniProt: F1SBI1 A0A4X1UZC2
Position
17:complement(26352945..26381677)
AA seq 299 aa
MQKLGEGEGSMTKEEFAKMKQELEAEYLAVFKKTVSSHEVFLQRLSSHPVLSKDRNFHVF
LEYDQDLSVRRKNTKEMFGGFFKSVVKSADEVLFSGVKEVDDFFEQEKNFLINYYNRIKD
SCAKADRMTRSHKNVADDYIHTAACLHSLASEEPTVIKKYLLKVAELFEKLRKVESRVSS
DEDLKLTELLRYYMLNIEAAKDLLYRRTKALIDYENSNKALDKARLKSRDIKLAEAHQQE
CCQKFEQLSESAKEELINFKRKRVAAFRKNLIEMSELEIKHARNNVSLLQSCIDLFKNN
NT seq 900 nt   +upstreamnt  +downstreamnt
atgcaaaaactgggagagggtgaagggtcaatgaccaaagaagaatttgccaagatgaag
caagagctggaagctgagtatcttgctgtctttaagaagactgtgtcctctcatgaggtc
ttccttcagcggctctcctctcatcctgttctcagtaaagatcgaaactttcatgttttc
ctggaatatgaccaagatctaagtgttaggaggaaaaataccaaagagatgtttggtggc
tttttcaaaagtgtggtgaaaagtgctgatgaagtccttttttcaggagttaaggaggta
gatgatttctttgaacaagagaagaattttctcattaactattataatagaatcaaggat
tcatgtgcaaaggctgacagaatgaccagatctcataaaaatgttgctgacgactatatc
cacactgcagcttgcctgcatagtctcgcttcagaagagcccacggtcatcaaaaagtac
ctattgaaggttgctgagctatttgaaaaacttaggaaagtagagagtcgggtctcctca
gatgaagacttgaagctgacagagctcctccggtactacatgctcaacattgaggctgct
aaggatctcttatacagacgcaccaaagccctcattgactatgagaattcaaacaaagca
ttggataaggcccggttaaaaagcagagacatcaagttggctgaggcacaccagcaagaa
tgctgccagaaatttgaacagctttctgaatctgcaaaagaagagctgatcaatttcaaa
cgaaagagagtggcggcatttagaaagaatctaattgaaatgtcagaactggaaataaag
catgccaggaacaatgtctccctcctgcagagctgcattgacttgttcaagaacaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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