KEGG   Sus scrofa (pig): 100155419
Entry
100155419         CDS       T01009                                 
Symbol
POGK
Name
(RefSeq) pogo transposable element with KRAB domain
Organism
ssc  Sus scrofa (pig)
SSDB
Motif
Pfam: DDE_1 BrkDBD KRAB HTH_Tnp_Tc5
Other DBs
NCBI-GeneID: 100155419
NCBI-ProteinID: NP_001231188
Ensembl: ENSSSCG00000006319
UniProt: F1S247 A0A8D1TXV8
Position
4:complement(84188993..84204869)
AA seq 609 aa
MESTAYPLNFVLKEEEQEEEIRSRELEDGPTDMQKVRICSEGGWVPALFDEVAIYFSDEE
WEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMITRLEGEEESQNSDEWQLQGGTFAE
NEESDLKPPDWASPMHTASQFPQPQHLDGFGLRLPRDITELPEWGEGYPFYMAMGFPGYD
LSADDLAGKFQFSRGMRRSYDAGFKLMVVEYAESTNNCQAAKQFGVLEKNVRDWRKVKPQ
LQNAHAMRRAFRGPKNGRFALVDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPE
KGFKASLGWCRRMMRRYDLSLRHKVPVPQQLPEDLTEKLVTYQRSVLALRRAHDYQVAQM
GNADETPICLEVPSRVTVDNQGEKPVLVKTPGREKLKITAMLGVLADGRKLPPYIILRGT
YIPPGKFPSGMEIRCHRYGWMTEDLMQDWLEVVWRRRTGAVPKQRGMLILNGFRGHATDS
VKSSMESMNTDMVIIPGGLTSQLQVLDVVVYKPLNDSVRAQYSNWLLAGNLALSPTGNAK
KPPLGLFLEWVMVAWNSISSESIVQGFKKCHISSNLEDEDDVLWEIESELPGGGEPPKEC
DTESLTESN
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggaatccacagcctaccctctcaatttcgtcctgaaggaagaggaacaagaagaagag
attaggagccgggaactggaggatggtcccacagatatgcagaaggtccgaatctgctca
gagggcggatgggtgccggccctgttcgatgaggtggccatatatttctctgatgaggag
tgggaagttttgacggagcaacaaaaggccctctaccgggaggtcatgaggatgaattat
gaaactgtcctgtccctggaattcccattccctaagcccgacatgatcactcggttggaa
ggggaggaggagtctcagaattccgacgaatggcagctccaaggaggaacctttgcagaa
aatgaagaatccgacctgaagcccccggattgggcaagcccgatgcacacggcctcccag
tttccccagcctcagcacctggacggctttggcctccgtctgcctcgggacatcacagag
ctgcccgagtggggcgaggggtaccccttctacatggccatgggcttccctggctacgac
ctctcggccgacgacctggccggcaagtttcagttcagccggggcatgcgccgtagttac
gacgctgggttcaagctcatggtggtggagtatgcggagagcactaataactgccaggcg
gccaagcagtttggggtgctggagaaaaacgtccgcgactggcgcaaggtgaagccacag
ctgcagaatgcgcatgccatgcggcgcgccttccggggccccaaaaacgggcgctttgcc
cttgtggaccaacgtgtggctgagtacgttcgatacatgcaggccaagggggaccccatc
actagggaggccatgcagctgaaagctctcgagatcgcccaggaaatgaacattccagag
aaagggttcaaggccagcttgggttggtgccgcagaatgatgcgaaggtatgacttgtct
ctgcggcataaggtgccggtgccccagcagctgcccgaagatttgactgagaagcttgtc
acctaccagcgaagtgtcctggccctgcgaagggcgcacgactaccaggtggctcagatg
ggaaatgcagacgagacgcccatttgcttggaggtgccctcaagggtgactgtggacaac
cagggtgaaaagccggtcttggtcaagacaccaggcagggagaaactgaaaatcacggct
atgcttggcgtcctggctgatgggaggaagttacctccgtacatcattctgaggggtacg
tacatcccccccgggaagttccccagtggcatggaaatccgctgccaccggtatggatgg
atgacggaggacttgatgcaggactggttggaagtggtgtggaggcggaggactggcgcc
gtgcccaagcagcgggggatgctgatcctgaacggcttccggggtcacgccacggattcg
gtgaagagctccatggaaagcatgaacactgacatggtcatcatcccggggggcctgacc
tcgcagctgcaggtgttagatgtggtggtctacaaaccgctgaatgacagtgtccgggcg
cagtactccaattggcttctggcgggaaacctggcgctgagccccactgggaacgccaag
aagccgccccttggcctctttctggagtgggtcatggtagcgtggaacagcatctcaagt
gaatccattgtccaagggttcaagaagtgccacatctccagcaacttggaagatgaagat
gacgtcctatgggaaattgagagcgagttgccaggaggaggggagccacccaaagagtgt
gacacggagagcctgacagagagcaactga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system