KEGG   Sus scrofa (pig): 100156127
Entry
100156127         CDS       T01009                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone H2B type 1-M
  KO
K11252  histone H2B
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04613  Neutrophil extracellular trap formation
ssc05034  Alcoholism
ssc05203  Viral carcinogenesis
ssc05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100156127
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100156127
  09163 Immune disease
   05322 Systemic lupus erythematosus
    100156127
  09165 Substance dependence
   05034 Alcoholism
    100156127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100156127
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100156127
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    100156127
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100156127
SSDB
Motif
Pfam: Histone CBFD_NFYB_HMF YscO-like TFIID_20kDa DUF6246
Other DBs
NCBI-GeneID: 100156127
NCBI-ProteinID: XP_001927974
Ensembl: ENSSSCG00000026757
UniProt: F2Z584 A0A8D0X5U9
Position
7:20842185..20842659
AA seq 126 aa
MPEPTKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
GIMNSFVNDIFERIAGEASRLAHYNKRXTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
KYTSSK
NT seq 381 nt   +upstreamnt  +downstreamnt
atgcctgaaccaacgaaatctgctccagccccgaagaagggctccaagaaagccgtgacc
aaggcgcagaaaaaagatggcaagaagcgcaagcgcagccgcaaggagagctactccgtg
tacgtgtacaaggtgctgaagcaggtccaccccgacaccggcatctcgtccaaggccatg
ggcatcatgaactccttcgtcaacgacatcttcgagcgcatcgcgggtgaggcctcgcgg
ctggcgcattacaacaagcgtncgaccatcacgtcccgggagatccagacggccgtgcgg
ctgctgctgcccggggagttggccaagcacgccgtgtctgagggcaccaaggccgttacc
aagtacaccagctccaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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