KEGG   Sus scrofa (pig): 100156173
Entry
100156173         CDS       T01009                                 
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03013  Nucleocytoplasmic transport
ssc03015  mRNA surveillance pathway
ssc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100156173 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100156173 (RBM8A)
   03015 mRNA surveillance pathway
    100156173 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100156173 (RBM8A)
   03041 Spliceosome [BR:ssc03041]
    100156173 (RBM8A)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100156173 (RBM8A)
Spliceosome [BR:ssc03041]
 Complex C
  Other components
   EJC/TREX
    100156173 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 100156173
NCBI-ProteinID: XP_001927895
Ensembl: ENSSSCG00000028509
UniProt: I3LI59 A0A8D1IM57
Position
4:99408422..99411964
AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtgttggatcttcatgaggccgggggcgaggatttcgcgatggatgaggat
ggggacgagagcatccacaaactgaaagaaaaagcgaagaaacgaaagggccgtggcttt
ggctccgaagaggggtctcgagcgcggatgcgtgaagattatgacagcgtggagcaggat
ggcgatgaacccggaccacaacgctctgttgaaggttggattctctttgtcactggagtc
catgaggaagccacggaagaagatatccatgataaatttgcggagtatggggaaataaaa
aacatccacctcaacctggacaggcgtacgggatatctaaaggggtatactctagttgag
tatgaaacatacaaggaggcccaggctgctatggaggggctcaatggtcaggatttgatg
ggacagccgatcagcgtggactggtgttttgttcggggtccacccaagggcaagaggaga
ggtggccgaagacgcagcaggagtccagaccggaggcgtcgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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