KEGG   Sus scrofa (pig): 100156353
Entry
100156353         CDS       T01009                                 
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X6
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03013  Nucleocytoplasmic transport
ssc03015  mRNA surveillance pathway
ssc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100156353 (ACIN1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100156353 (ACIN1)
   03015 mRNA surveillance pathway
    100156353 (ACIN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100156353 (ACIN1)
   03041 Spliceosome [BR:ssc03041]
    100156353 (ACIN1)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100156353 (ACIN1)
Spliceosome [BR:ssc03041]
 Complex C
  Other components
   EJC/TREX
    100156353 (ACIN1)
SSDB
Motif
Pfam: RSB_motif SAP RRM_1
Other DBs
NCBI-GeneID: 100156353
NCBI-ProteinID: XP_013833673
Ensembl: ENSSSCG00000002034
UniProt: A0A8D1QFI1 A0A4X1V4M6
Position
7:75951203..75989234
AA seq 1220 aa
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEE
ASAESEDEMIHPEGVSSLLPPDFQSSLERPELELSRHSPRKSSSISEEKGESDDEKPRKG
ERRSPRVRQARAAKLSECNQAAEEEEDQETPSRSLRVRADRNLKTEEEEEEEEEEEEEEE
EEDDDEGQKSRDAPVLKQFKEEEGEEIPRVKAVNVIDERPPTIRSQEQEGLERGGRVTRS
QEEARRSHLARHQQEKDTKTVSPLEDEEREIKPSKGLEEKSKSPSPPRLTEDLGKAPVVL
QPEQTVSEEETPPPLLTKEASSPPPNTQLQSEEEIEPMEGPAPPVLIQLSPPNTDAEAKE
LLLSQHTVQLVGGLSPLSSPADTKAESPVEKVPEENVLPLTQKSTVAESSTQKSLEAESE
KCAQPLPLKIEELALAKGITEESLEQKEGRRASHSLLLSHRLKRSADSSSSRSSSSSSSS
SRSRSRSPDSSGSQSHSPARSKQRDVSRAHTHANPRGRSKTGSRSTSESRSRSCSRSRSA
SSNSRKGSPKKCEAEEAEPPAAMQPQTSETQTSHLPESERIHLTVEEKEEVTMDTSENRP
ENEVPEPPMPIADQVSNDDRPEGSAEDEEKKESSQPKSFKRKISVVSATKGVPAGNSDTE
GGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDE
TERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALP
PPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVR
PFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKF
LCADYAEQDELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERA
VREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEK
AQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQK
EREKEAERERTRQLEREKRREHSRERDRERDRDRERDRGDRDRERERDRERGRERDRRDT
KRHSRSRSRSTPVRDRGGRR
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctgaaggccgcactg
gaacagcgaggcctagccaagagcgggcagaagagtgccctggtcaagcggctcaaaggg
gctctaatgctagaaaatttacagaaacactcaacaccccatgctgcattccagccaaat
tcccagattggcgaggaaatgagccagaacagtttcataaagcagtatctggaaaagcaa
caggagctgcttaggcagcgtctagaacgtgaagctcgagaagctgcagaacttgaagaa
gcttcagctgagtcggaggacgagatgatccatcccgagggagtgtcttccctgctgcct
cctgactttcagagcagcctggagagaccagagctggagctcagcagacattcacccaga
aaaagttcctctatttctgaagagaaaggtgaatctgatgatgagaaaccaaggaaagga
gaaagacgatcacctagagttagacaggcaagagcagctaaactctctgagtgcaaccag
gctgctgaggaagaagaggatcaagaaacaccttccagaagtctgagggtcagagcagat
cgaaatttgaaaacagaggaagaagaagaggaagaagaggaggaagaggaggaggaagag
gaggaagatgatgatgaaggacaaaaatcaagggatgcaccagtcctgaaacagtttaag
gaagaagagggggaagagatacccagagtaaaagcagtgaatgtgatagatgagagaccc
cctactataagatctcaggagcaggagggtttagagagaggagggagagttacaaggtcc
caggaagaggctagaagaagtcacctggccagacatcagcaggagaaagacacaaaaaca
gtttctcctcttgaggatgaagaaagagaaataaaaccttcaaaaggcttggaggaaaaa
tcaaagtccccatcccctcctcgactgactgaagatctggggaaggcccctgttgtgctg
cagccagaacagactgtcagtgaggaggagactcccccacctttacttaccaaggaagca
tcttccccaccacctaatacacaactccagagtgaagaagaaatagaacccatggaaggc
ccagcccctcctgtactcattcagttatctcctcctaatacagatgctgaggccaaggag
ctcttactatctcagcatacagtgcagttggtgggaggcctgtctcctttgtcaagtcct
gcagacaccaaagcagaatctccagtcgagaaagtgccagaggagaatgttctgcctcta
actcaaaaaagcacagtagccgaatcctcaactcagaagagtcttgaagctgagtcagag
aaatgtgctcagccacttcctctaaaaattgaggagttagcactggccaaagggatcact
gaggaatctttggaacagaaggaaggcagaagggcttctcattcccttcttctaagccac
agattgaaacgctcggctgactcatcctctagccggtcctcctcatcttcatcctccagt
tctagatcaagatcacgctctcctgacagctcaggctctcagtctcactcacctgcaaga
tccaagcagagagatgtatctcgggcacatactcatgccaatcctcgtggtagatccaag
acaggctccagatcaacctcagagtccaggtcacgttcctgttctcgttcacgttcagca
tcaagcaacagcagaaaagggagcccaaagaagtgcgaagctgaagaggcagagccacca
gctgccatgcagccccaaacctcagagactcagacctctcacctaccagaatctgaaagg
attcatctcactgttgaggagaaggaggaagtgaccatggacacaagtgaaaacagacct
gaaaatgaggttccagagccccccatgcctattgcagaccaagtcagcaatgatgaccgc
ccagagggcagtgcagaggatgaggagaagaaagagagttcgcagcccaaatcattcaag
aggaagatctccgttgtctcagctaccaagggggtgccagctggaaacagtgacacagag
gggggccagcctggtcggaagcggcgttggggagccagcacagccaccacacagaagaaa
ccctccatcagtatcaccaccgaatcactcaagagcctcatccccgacatcaaacccctg
gcggggcaggaggctgttgtggatcttcatgctgacgactccagaatctctgaggatgag
acagagcgtaatggtgacgatgggactcatgacaaggggctgaaaatatgccggaccgtc
actcaggtagtacctgccgagggccaggagaacgggcagagggaagaggaggaagaagag
aaggagcctgaagcagaagcccctgtacctccccaggtctcagtagaagtggctttgccc
ccacccgtggagcatgaagtaaagaaagtgactttaggagataccttaactcgacgttcc
attagccagcagaagtctggagtttccattacaattgatgacccagtccggactgctcaa
gtgccctccccaccccggggcaagatcagtaacatcgtccacatctccaatttggttcgt
cccttcactttaggccaactgaaggaattgttgggacgtacgggaactctggtagaagag
gctttctggattgacaagatcaaatctcattgctttgtaacgtactcaacagtagaggaa
gcagttgccacccgcacagctctacatggggtcaaatggcctcagtccaatcccaaattc
ctttgtgctgactatgctgagcaagatgagctggattatcaccgaggcctcttggtagac
cgaccgtctgaaacgaaaacagaggagcagggggtaccacggccgctgcaccccccgccc
cctcccccagcccagccaccacagcaccccagggcagagcagcgggaacaggagcgggcg
gtgcgggagcagtgggcagagcgggaacgggaaatggagcggcgagaacgaactcgatct
gagcgtgaatgggatcgggataaagttcgagaaggaccccggtcccggtcccggtcccgt
gaccgccgccgcaaggaacgtgcaaagtctaaggaaaaaaagagtgagaagaaagagaaa
gctcaggaagagccacctgccaagctgctggacgaccttttccgtaagaccaaggcagct
ccctgcatctattggctcccactgactgacagccagattgttcagaaggaggcagagcgg
gctgaacgggccaaggagcgggagaagcggcgaaaggagcaagaagaagaggagcagaag
gagcgggagaaggaggcggagcgggaacggacccgacagctggaaagggagaagcggcga
gagcacagccgggagagggacagggagagagacagggacagggaaagggacaggggggat
cgagatcgggagagggagagggatcgggaacgaggcagggagagggaccgcagggacacc
aagcgccacagcaggagccggagtcggagcacacctgtgcgggaccggggtgggcgccgc
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (13)   
   RefSeq(nuc) (11)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (77)   

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