KEGG   Sus scrofa (pig): 100156534
Entry
100156534         CDS       T01009                                 
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
  KO
K04957  hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04024  cAMP signaling pathway
ssc04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    100156534 (HCN4)
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    100156534 (HCN4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100156534 (HCN4)
Ion channels [BR:ssc04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   100156534 (HCN4)
SSDB
Motif
Pfam: Ion_trans Ion_trans_N cNMP_binding Ion_trans_2 LPD1
Other DBs
NCBI-GeneID: 100156534
NCBI-ProteinID: XP_003128545
Ensembl: ENSSSCG00000001920
UniProt: F1SIC3
Position
7:60010396..60052258
AA seq 1199 aa
MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDAEEEGAGGRQDPSRRSIRLRPLPSPSPSA
AAGGTEPRGAAHGAADSEGSARGTGKSSTNGDCRRFRGSLASLGSRGGSGAGAGGGSSHG
HLHDSAEERRLITEGDASPGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPVPASCE
QPSVDTAIKVEGGAAAGDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAV
EREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVFNV
VSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVE
TRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVN
LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIG
YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSF
HKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANAD
PNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYFGE
ICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSI
LLHKVQHDLNSGVFNYQENEIIQQIVQHDREMAHCAHRVQAAASGTPTPTPVIWTPLIQA
PLQAAAATTSVAIALTHHPRLPAAIFRPPPGPGLGGLGAGQTPRHLKRLQSLIPSALGSA
SPASSPSQADTPSSSSFHIQQLAGFSAPAGLSPLLPSSSSSPPPGVCGGSSPAPTPSTAA
ATATAGFGHFHKALGGSLSSSDSPLLTPLQPGARSPQTNQPPPPLPGARGGLGLLEHFLP
PPPSARSPSSSPGQLGQPPGELSPGVAAGPPSTPETPPRQPERLSLVAGASGGASPVAFT
PRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLT
QDLKLISASQPALPQDGAQTLRRASPHSSGESMAAFPLFPRAGGGSGSGGLGLPGRPYGA
IPGQHVTLPRKTSSGSLPPPLSLFGARAASSGGPPLTAAPQREPGARSEPVRSKLPSNL
NT seq 3600 nt   +upstreamnt  +downstreamnt
atggacaaactgccgccgtccatgcgcaagagactctacagccttccgcagcaggtgggg
gccaaggcgtggatcatggacgaggaagaggacgccgaggaggagggggctgggggccgc
caagaccccagccgaaggagcatccggctgcgtccgcttccttcgccttcaccctcggcg
gccgcaggcggcacggaaccccggggcgcggcccacggggcggcagacagcgaagggtcg
gcccgcggcaccggcaagtcgagcactaacggcgactgcaggcgcttccgcgggagcctg
gcatcactgggcagccggggcggcagcggcgccggagcagggggcggcagcagccacggg
cacctgcatgactccgcggaggagcggcggctcatcaccgagggcgacgcgtcccccggt
gaggacaggacgcccccgggcctggcggccgagcccgagcgccctggcgcctcggctcag
cccgcagcctcgccgccgccgccccagcagccgccgcagccggtccccgcctcctgcgag
cagccctcggtggacaccgcgatcaaagtggagggaggcgcggccgccggcgaccagatc
ctccccgaggcggaggtgcgcctgggccaggccggctttatgcagcgccagttcggggcc
atgctccagcctggggtcaacaaattctccctgcggatgtttggcagccagaaagcggtg
gagcgcgagcaggagagggttaagtcggccgggttttggattatccacccctacagcgac
ttcagattttactgggacctgacgatgctgcttctgatggtgggaaacctgatcatcatt
cctgtgggcatcaccttcttcaaggatgagaacactacaccctggattgtcttcaatgtg
gtgtcagacactttcttcctcatcgacttggtcctcaactttcgcacagggattgtggtg
gaggacaacacagagatcattctggacccacagcggattaagatgaagtacctcaaaagc
tggttcgtggtggatttcatctcctccatccctgtggactacatcttcctcattgtagag
acacgcatcgactcggaggtctacaagactgcccgggccctgcgcatcgtccgtttcacc
aagatcctcagcctcctgcgcctcttgcgtctctcccgcctcattcgatatattcaccag
tgggaagagatcttccacatgacctacgacctggccagcgccgtggtgcgcatcgtgaac
ctcattggcatgatgctcctgctctgccactgggacggctgcctgcagttcctggtgccc
atgctgcaggacttccccgatgactgctgggtgtccatcaacaacatggtgaacaactcc
tggggaaagcagtactcctacgccctcttcaaggccatgagccacatgctgtgcattggg
tacggccggcaggccccggtgggcatgtcggacgtctggctcaccatgctcagcatgatc
gtgggcgccacctgctacgccatgttcattggccacgccactgccctcatccagtcgctg
gactcctcccggcgccagtaccaggaaaagtacaagcaggtggagcagtacatgtccttc
cacaagctcccgcccgacacccggcagcgcatccacgactactacgagcaccgctaccag
ggcaagatgttcgatgaggagagcattctgggcgagctgagtgagcccctgcgggaggag
atcatcaactttaactgccgcaagctggtggcctccatgccgctgtttgccaacgcggac
cccaacttcgtgacctccatgctgaccaagctgcgcttcgaggtcttccagccgggagac
tacatcatccgcgaaggcaccattggcaagaagatgtacttcatccagcacggtgtggtc
agcgtgctcaccaagggcaacaaggagaccaagctggcggatggctcctattttggagag
atctgcctgctgacgaggggccgacgcacagccagcgtcagggctgacacgtactgccgc
ctctactcgctaagcgtggacaacttcaacgaggtgctggaggagtaccccatgatgcgg
cgggccttcgagaccgtggcgctggaccgcctggaccgcatcggcaagaagaactccatc
ctccttcacaaagttcagcacgacctcaactcaggcgtctttaactaccaggaaaacgag
atcatccagcagatcgtgcagcacgaccgggagatggcgcactgcgcccaccgcgtccag
gctgccgcctccggcacgccgacccccacgcccgtcatctggaccccgctgatccaggca
ccgctgcaggcggcagccgccaccacttccgtggccatcgccctcacccaccacccgcgc
ctgcccgctgccatcttccggcctcccccggggccggggcttggcggcctcggggcgggg
cagacgcccaggcacctgaagcggctgcagtccctgatcccgtctgcgctgggctctgcc
tcgcccgccagcagcccgtcgcaggcggacacgccgtcttcctcctccttccacatccag
cagctggccggattctctgcacctgccggcctgagcccgctcctgccctcgtccagctcc
tccccaccgccaggggtctgcggcggctcctccccagcgcccacgccatccaccgctgca
gccaccgccaccgctgggttcggccacttccacaaggcgctgggtggctccctgtcctcg
tccgactctcccctgctcacgccgctgcagccaggcgcccgctccccacagaccaaccag
cctccgcccccgctgcccggggcccggggcggcctgggactcctggagcacttcctgccg
cccccaccctcagccaggtccccgtcgtccagccctgggcagctgggccagcctcccggg
gagctgtcccccggcgtggccgctggccctccaagtacgccagagacaccccctcggcag
cctgagcggctgtccttggtggcaggggcctctgggggggcgtctcctgtagcctttacc
ccccgagggggtctcagcccccctggccacagcccaggccctccgagaactttcccaagt
gccccgccccgggcctctggctcccacggttccctgctcctgccacctgcatccagtccc
ccgccaccccaggtcccccagcgccggggcacgccacccctcaccccgggccgcctcacc
caggacctcaagctcatctcagcctctcagcctgccctgccccaggacggggcgcagact
ctccgcagagcctccccgcattcctctggggagtcaatggctgccttcccgctctttccc
agagccgggggcggcagcggcagtgggggcctcggtctccccgggaggccctatggtgcc
atccccggccagcacgtcactctgcctcggaagacatcctcaggttctttgccacccccg
ctttctttgtttggggcaagagccgcctcttctggggggccccctctgactgctgctccc
cagagggaacctggggcccggtctgagccagtgcgctccaaactgccctccaacctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (50)   

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