KEGG   Sus scrofa (pig): 100156790
Entry
100156790         CDS       T01009                                 
Symbol
PSMA6
Name
(RefSeq) proteasome subunit alpha type-6
  KO
K02730  20S proteasome subunit alpha 1 [EC:3.4.25.1]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03050  Proteasome
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05017  Spinocerebellar ataxia
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    100156790 (PSMA6)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100156790 (PSMA6)
   05012 Parkinson disease
    100156790 (PSMA6)
   05014 Amyotrophic lateral sclerosis
    100156790 (PSMA6)
   05016 Huntington disease
    100156790 (PSMA6)
   05017 Spinocerebellar ataxia
    100156790 (PSMA6)
   05020 Prion disease
    100156790 (PSMA6)
   05022 Pathways of neurodegeneration - multiple diseases
    100156790 (PSMA6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    100156790 (PSMA6)
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ssc03051]
    100156790 (PSMA6)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     100156790 (PSMA6)
Peptidases and inhibitors [BR:ssc01002]
 Threonine peptidases
  Family T1: proteasome family
   100156790 (PSMA6)
Proteasome [BR:ssc03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   alpha type subunits
    100156790 (PSMA6)
SSDB
Motif
Pfam: Proteasome Proteasome_A_N
Other DBs
NCBI-GeneID: 100156790
NCBI-ProteinID: NP_001132944
Ensembl: ENSSSCG00000001951
UniProt: B6VAQ2
Position
7:complement(64578247..64603351)
AA seq 246 aa
MSRGSSAGVDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLFTVLSIDFKPSEIEVGVVTVENPKFRIFTEAEIDAHLV
ALAERD
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtcccgtggttccagcgctggtgttgaccgtcacattaccattttttcccccgagggc
cggctgtaccaagtagaatatgcttttaaggcaattaaccagggtggccttacatcagta
gccgtcagagggaaagactgtgcagtaattgtcacacagaagaaagtacctgacaaatta
ctggattccagcacagtgactcacttattcaagataactgaaaacatcggctgtgtgatg
acaggaatgacagctgacagcagatcccaggtacagagggcacgttatgaggcagctaat
tggaaatacaagtatggttatgagattcctgtggacatgctgtgtaaaaggattgctgat
atttctcaggtctacacacagaatgctgaaatgaggcctcttggttgttgtatgatttta
attggcatagacgaagaacaaggccctcaggtgtataagtgtgatcccgcaggttactac
tgtgggtttaaagccactgcagcaggagttaaacaaaccgagtcaaccagcttccttgaa
aagaaagtgaagaagaaatttgattggacatttgaacagacagtggaaactgcaattaca
tgcctgtttactgttctatcaattgatttcaagccttcagaaatagaagttggagtggtt
acagttgaaaatcctaaattcaggatttttacagaagcagagattgacgctcaccttgtt
gctctagcagagagagactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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