KEGG   Sus scrofa (pig): 100156847
Entry
100156847         CDS       T01009                                 
Symbol
SIX1
Name
(RefSeq) homeobox protein SIX1
  KO
K15614  homeobox protein SIX1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    100156847 (SIX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100156847 (SIX1)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    100156847 (SIX1)
SSDB
Motif
Pfam: SIX1_SD Homeodomain Homeobox_KN HTH_3 YdaS_toxin Phage_mat-A
Other DBs
NCBI-GeneID: 100156847
NCBI-ProteinID: NP_001186647
Ensembl: ENSSSCG00000005087
UniProt: E5DCJ4 A0A4X1WCT7
Position
1:complement(189620430..189624652)
AA seq 284 aa
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQGNMGH
ARSSNYSLPGLTASQPTHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtcgatgctgccatcgttcggcttcacacaggagcaagtggcttgcgtgtgcgaggtt
ctgcaacaaggtgggaacctggagcgcctgggcaggttcctgtggtcgctgccagcctgc
gaccacctgcacaagaacgaaagtgtgctcaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgcgagctttacaagatcctggagagccaccagttctcgcctcacaaccac
cccaagctgcaacaactgtggctgaaggcgcactacgtggaggctgagaagttgcgcggt
cggcccctgggcgcggtgggcaaatatcgggtgcgccgaaaattcccgttgccgcgcact
atctgggacggcgaagagaccagctactgcttcaaggagaagtcgcggggcgtgttgcgg
gagtggtacgcccataacccctacccctcgccgcgtgagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggttcaagaaccgaaggcaacgagaccgg
gccgccgaggccaaggaaagggagaacaccgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggaaagccgctcatgtccagctcagaagaagaattc
tcacctccccaaagtccagaccagaactcggtccttctgctgcagggcaatatgggccac
gccaggagctcaaactattccctcccgggtttaacggcctcgcagcccacccacggcctg
caagcccaccagcatcagctccaggactccctgctgggccccctcacctccagtctggtg
gacttagggtcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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