KEGG   Sus scrofa (pig): 100156939
Entry
100156939         CDS       T01009                                 
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100156939 (COPB2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100156939 (COPB2)
Membrane trafficking [BR:ssc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100156939 (COPB2)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100156939 (COPB2)
SSDB
Motif
Pfam: Coatomer_WDAD WD40 NBCH_WD40 WD40_2 Helicase_dom4_arc
Other DBs
NCBI-GeneID: 100156939
NCBI-ProteinID: XP_005669941
Ensembl: ENSSSCG00000011662
UniProt: A0A4X1TS96 F1SL54
Position
13:complement(80220460..80264808)
AA seq 906 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRSAAQQELAGKPASPTPVIMATHTGNKEEKSLLELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgcctctgcgactcgatatcaagagaaagctaactgctcgatccgatagagttaagagt
gtggatttgcatcctacagagccatggatgttggcgagtctttacaatggcagtgtgtgt
gtttggaatcatgaaacacagacactggtgaaaacattcgaagtatgtgatcttcctgtt
cgagccgcaaagtttgttgcaaggaagaattgggttgtgacaggagcggatgacatgcaa
attagagtgttcaactacaacactctggagagagttcatatgtttgaagcgcattcagac
tacattcgatgtattgccgttcatccaacccagcctttcattctaactagcagtgatgac
atgcttattaaactctgggactgggataaaaaatggtcttgctcacaagtgtttgaagga
cacacccattatgttatgcagattgtgatcaaccccaaagataacaaccagtttgccagc
gcttctttggacaggactatcaaggtgtggcagctgggctcctcatcaccaaacttcact
ctggagggacatgagaaaggcgtgaattgcatcgattactacagtggtggcgacaagcca
tacctcatttcaggtgcagatgaccgtcttgtgaaaatatgggactatcagaataaaaca
tgtgtgcaaacgctggaggggcacgcccaaaacgtgtcttgtgccagttttcatcctgag
ctgccaatcatcatcacaggttcagaggatggaactgtgcgaatttggcattcaagcacc
tatcgcctcgagagtaccttgaattatggaatggagagggtgtggtgtgtggccagtctg
agagggtccaacaacgttgctttgggctatgatgaagggagcatcattgttaagcttggt
cgggaggaacctgccatgtccatggatgccaatggaaagataatttgggccaaacattca
gaggtccagcaggccaacctaaaagcaatgggagatgctgaaattaaagatggagaaaga
ttgccactggcagtaaaggatatgggcagttgtgaaatataccctcagactattcagcac
aatcctaatgggcggtttgttgtggtgtgtggtgatggcgagtatatcatctatacggca
atggccttaagaaacaagagctttgggtctgcccaggagtttgcgtgggcccacgattct
tcagaatatgcgatcagagagagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaaatcatttaaaccagattttggagctgaaagtatctatggaggcttcttactggga
gtgagatctgtcaatggcttagctttctacgattgggacaatacagagctcatacgcagg
attgaaattcagcccaaacacattttctggtctgactctggagagctagtctgtattgct
actgaggaatcattttttatccttaagtatctgtcggagaaagtcttggctgcacaggaa
acacacgagggggttactgaagatggcattgaagatggctttgaggttcttggtgagatt
caggaaattgtgaaaacagggctgtgggtaggcgactgcttcatatacacaagttctgtg
aacagattaaattattatgttggaggagaaatagtcaccattgcccacttggacaggaca
atgtatctcctgggctatattcctaaagacaacaggctttatttgggggataaggaacta
aatatcgttagctactccctgctggtttcagtgctggaataccagacggctgtcatgcgg
agggacttcagcatggctgacaaggtcctcccgaccatcccaaaagagcagaggaccaga
gttgcacactttttggaaaagcagggcttcaagcagcaagctcttacagtatccacagat
cctgagcatcgctttgaacttgctcttcagcttggagaactaaaaattgcataccagctg
gccgtggaagcagagtcagaacagaagtggaaacaacttgctgaacttgccatcagtaaa
tgccagtttggcctggcccaggagtgcctgcaccatgcacaggactatgggggtctgttg
cttttggccactgcctctggaaatgctagcatggtgaacaagctagcagagggtgcagag
cgagacggcaagaataatgtggcattcatgagctactttttacagggcaagcttgatgct
tgcctggagctcttgattagaactggacgactgccagaagctgccttcttggcacggact
tacttacccagtcaggtttcaagggtggtgaaactctggagagaaaatctctcaaaagtc
aatcagaaagcagccgaatcccttgctgatccaacagaatatgaaaacctctttcctgga
ttaaaagaagcctttgttgtggaagaatgggtgaaggaaacacatgctgacctgtggccg
gccaaacaatacccactggtcacgccaaatgaagaaagaaatgttatggaagaggcaaaa
ggcttccagccgtcaagatctgcagctcagcaggaacttgctgggaaacctgcttctcct
actcctgttattatggccacccacacaggcaacaaagaagaaaagagtttacttgaactg
gaagtagatttggataatttggaattagaagacattgacacaacagatatcaacctggat
gaagatattttggatgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

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