KEGG   Sus scrofa (pig): 100216310
Entry
100216310         CDS       T01009                                 
Symbol
SYN1
Name
(RefSeq) synapsin-1
  KO
K19941  synapsin
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100216310 (SYN1)
Membrane trafficking [BR:ssc04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100216310 (SYN1)
SSDB
Motif
Pfam: Synapsin_C Synapsin Synapsin_N Dala_Dala_lig_C
Other DBs
NCBI-GeneID: 100216310
NCBI-ProteinID: NP_001135460
Ensembl: ENSSSCG00000012276
Vega: OTTSUSG00000004537
UniProt: B7TY10 A0A8D2ABL6
Position
X:complement(42090245..42142254)
AA seq 712 aa
MNYLRRRLSDSNFMANLPNGYMTDLQRPQPPPPPPAAPSPGATPGPGTATAERASSSAPV
ASPAAPSPGSSGGGGFFSSLSNAVKQTTAAAAATFSEQVGGGSGGAGRGGAAARVLLVID
EPHTDWAKYFKGKKIHGEIDIKVEQAEFSDLNLVAHANGGFSVDMEVLRNGVKVMRSLKP
DFVLIRQHAFSMARNGDYRSLVIGLQYAGIPSVNSLHSVYNFCDKPWVFAQMVRLHKKLG
TEEFPLIDQTFYPNHKEMLSSTTYPVVVKMGHAHSGMGKVKVDNQHDFQDIASVVALTKT
YATAEPFIDAKYDVRVQKIGQNYKAYMRTSVSGNWKTNTGSAMLEQIAMSDRYKLWVDTC
SEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPR
QRQRDASPGRGSHSQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPP
LQQRPTPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQATQLTQGQGRQSRPVAGGP
GAPPAARPPASPSPQRQAGPPQATRQTSVSGQAPPKASGAPPGGQQRQGPPQKPPGPAGP
TRQASQAGPMPRTGPPTTQQPRPSGPGPAGRPTKPQLAQKPSQDVPPPAAAAAAAAAAAG
GPPHPQLNKSQSLTNAFNLPEPAPPRPSLSQDEVKAETIRSLRKSFASLFSD
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgaactacctgcggcgccgcctgtcggacagcaacttcatggccaatctgccaaatggg
tacatgacagacctgcagcgcccgcagccgcccccgccgccgcctgctgcccccagcccc
ggagccacgcccggtcctgggaccgccactgccgagagggcctcctcatccgcccctgta
gcctctccggctgcccctagccctgggtcctcggggggcggtggcttcttctcctcgctg
tccaatgcggtcaagcagaccacggcggccgcggccgccaccttcagcgagcaggtgggc
ggcggctctgggggcgcaggccgtgggggcgccgccgccagggtgttgctggtaatcgac
gagccccacaccgactgggcgaaatacttcaaagggaaaaagatccatggagaaattgac
attaaagtagaacaggctgaattctctgatctcaacctcgtggctcatgccaatggtgga
ttctccgtggacatggaagttcttcggaatggggtgaaggtcatgcggtctctgaagcca
gacttcgtgctgatccgccagcatgccttcagcatggcgcggaatggagattaccgcagt
ttggtcatcgggctgcagtatgccggaatccccagcgttaactctttgcattctgtctac
aacttctgtgacaagccctgggtgtttgcccagatggttcggctgcacaagaaactgggg
acagaggaattcccgctaatcgatcagaccttctacccaaatcacaaagagatgctcagc
agcacaacgtaccctgtggttgtgaagatggggcatgcgcactctgggatgggcaaggtc
aaggtggacaaccagcacgacttccaggacatcgcaagtgtcgtggctctgaccaagaca
tatgccactgccgagcccttcattgatgccaaatacgatgtgcgtgtccagaagattggg
cagaactacaaggcctacatgaggacgtcggtgtcaggaaactggaagaccaacaccggc
tccgcgatgcttgagcagattgccatgtctgacaggtacaagctgtgggtggacacgtgc
tcggagatctttgggggactggacatctgtgcagtggaagcgttgcatggcaaggacggg
agggatcacatcatcgaggtggtgggctcctccatgccgctcatcggggaccaccaggat
gaggacaagcagctcatcgtggagctcgtggtcaacaagatggcccaggccctgccccgg
cagcggcagcgggatgcctcccccggccggggctcccacagccagacgccgtccccaggg
gccctgcccttgggccgccagacctcccagcagcccgcggggcccccggctcagcaacga
cccccaccgcagggtggccctccacagccgggcccaggcccccaacgccagggacccccg
ttgcagcagcgcccgaccccgcagggccagcagcacctttcgggccttggacccccagcc
ggcagccccctgccccagcgcctgccaagtcccacatcagcgccccagcagcctgcatcc
caggccacccagctgacccagggtcaaggccgccaatcccggccagtggcgggaggacct
ggggcacctccagcagctcgcccacctgcctccccatctccccagcgccaggcgggccca
ccacaggctactcggcagacatctgtctctggtcaggctccgccaaaggcctcgggggct
ccaccgggtggtcagcagcgccagggcccaccccagaaacccccaggccccgccggcccc
acacgccaggccagccaggcgggtcccatgccccgcactgggccacccaccacgcagcag
ccgcgacccagtggcccaggccctgctggacgtcccaccaagccacagctggcacagaaa
cctagccaggacgtgccaccgcctgctgctgctgccgctgctgctgctgctgctgccggg
ggacccccacacccccagctcaacaaatcccagtctctgaccaatgccttcaaccttcca
gagccagccccgcccaggcccagccttagccaggacgaggtgaaagctgagaccatccgc
agcctgaggaagtctttcgccagcctcttctccgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (56)   

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