KEGG   Sus scrofa (pig): 100217386
Entry
100217386         CDS       T01009                                 
Symbol
XBP1
Name
(RefSeq) X-box-binding protein 1 isoform XBP1(U)
  KO
K09027  X box-binding protein 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04141  Protein processing in endoplasmic reticulum
ssc04932  Non-alcoholic fatty liver disease
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05017  Spinocerebellar ataxia
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100217386 (XBP1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100217386 (XBP1)
   05012 Parkinson disease
    100217386 (XBP1)
   05014 Amyotrophic lateral sclerosis
    100217386 (XBP1)
   05017 Spinocerebellar ataxia
    100217386 (XBP1)
   05022 Pathways of neurodegeneration - multiple diseases
    100217386 (XBP1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100217386 (XBP1)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    100217386 (XBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100217386 (XBP1)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   AP-1(-like) components, Jun
    100217386 (XBP1)
SSDB
Motif
Pfam: bZIP_1 bZIP_2 bZIP_Maf KASH_CCD DUF2408 YabA SAGA-Tad1 GAS
Other DBs
NCBI-GeneID: 100217386
NCBI-ProteinID: NP_001136308
Ensembl: ENSSSCG00000030996
Vega: OTTSUSG00000002899
UniProt: B7THW4
Position
14:complement(46011239..46016526)
AA seq 263 aa
MVVVAAAQSPTAGAPKVLLLSGKPAAAAAAGAPAGRALPIMVPGQRGASPEAASGGPPQT
RKRQRLTHLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQL
LREKTHGLVVENQELRQRLGMDALVTEEEAETKGNGAGPVAGSAESAALRLRAPLQQVQA
QLSPLQNISPWILTVLTLQTLSLISSWAFCSTWTQSCSSDVLPQTLPAWSSSQKSTQKDP
VPYQPPLLHHWGRHQPSWKPLMK
NT seq 792 nt   +upstreamnt  +downstreamnt
atggtggtggtggcagctgcgcagagcccgaccgccggggcccccaaagtactgcttctc
tccgggaagcccgccgccgccgccgccgctggagctccggccggccgggctctgcctatc
atggtgccgggccagcgaggggccagcccggaggcggcaagcggggggccgccccagacg
cgcaagagacagcgcctcacgcacctgagccccgaagagaaggcgttacggaggaaattg
aaaaacagagtagcagctcagactgccagagaccgaaagaaagctcgaatgagtgagctg
gagcaacaagtggtagatttggaagaagagaaccaaaagcttttgctagaaaatcagctt
ttacgagagaaaacacatggccttgtagttgagaaccaggagttaagacagcgcttgggg
atggatgccttagttactgaagaggaggcagagaccaaggggaatggagcggggccggtg
gccgggtctgctgagtccgcagcactcagactacgtgcacctctgcagcaggtgcaggcc
cagttgtcacccctccagaacatctccccatggattctgacggtgttgactcttcagact
ctgagtctgatatcctcttgggcattctgttcaacttggacccagtcatgttcttcagat
gtccttccccagactctgccagcctggagcagctcccagaagtcgacccagaaggaccca
gttccttaccagcctccccttcttcatcactggggacgtcaccagccaagctggaagcca
ttaatgaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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