KEGG   Sus scrofa (pig): 100217389
Entry
100217389         CDS       T01009                                 
Symbol
TMEM173
Name
(RefSeq) stimulator of interferon genes protein
  KO
K12654  stimulator of interferon genes protein
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04621  NOD-like receptor signaling pathway
ssc04622  RIG-I-like receptor signaling pathway
ssc04623  Cytosolic DNA-sensing pathway
ssc05163  Human cytomegalovirus infection
ssc05168  Herpes simplex virus 1 infection
ssc05170  Human immunodeficiency virus 1 infection
ssc05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100217389 (TMEM173)
   04622 RIG-I-like receptor signaling pathway
    100217389 (TMEM173)
   04623 Cytosolic DNA-sensing pathway
    100217389 (TMEM173)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100217389 (TMEM173)
   05171 Coronavirus disease - COVID-19
    100217389 (TMEM173)
   05168 Herpes simplex virus 1 infection
    100217389 (TMEM173)
   05163 Human cytomegalovirus infection
    100217389 (TMEM173)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100217389 (TMEM173)
Membrane trafficking [BR:ssc04131]
 Autophagy
  Xenophagy
   Other xenophagy associated proteins
    100217389 (TMEM173)
SSDB
Motif
Pfam: TMEM173 SapB_2
Other DBs
NCBI-GeneID: 100217389
NCBI-ProteinID: NP_001136310
Ensembl: ENSSSCG00000014349
Vega: OTTSUSG00000002488
UniProt: B8XX90
Structure
Position
2:complement(141359402..141367222)
AA seq 378 aa
MPYSSLHPSIPQPRGLRAQVAALVLLGACLVALWGLGELPEYTLRWLVLHLASQQIGLLV
KGLCSLAEELCHVHSRYQSSYWRAARACLGCPIRCGALLLLSCYFYFSIRDKAGLPLPWM
LALLGLSQALNILLGLQHLAPAEVSAICEKRNFNVAHGLAWSYYIGYLRLILPGLRARIQ
AYNQRHKNVLGGIGNHRLHILFPLDCGVPDDLSVADPNIRFLHELPQQSADRAGIKGRVY
TNSIYELLENGQPAGVCVLGYATPLQTLFAMSQDGRAGFSREDRLEQAKLFCRTLEDILA
DAPEAQNNCRLIVYQEPTEGGSFSLSQEILRHLRQEEREVTMGSAETSVVPTSSTLSQEP
ELLISGMEQPLPLRSDIF
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgccctactccagcctgcatccatccatcccacagcccaggggcctcagggctcaggtg
gcagccttggtccttctaggtgcctgcttggtggccctttgggggctgggggagctgcca
gaatacacgctccggtggctggtgctccacctggcctcccagcagataggactgctggtg
aaggggctctgcagtctggcggaggagctgtgccacgtccactccaggtaccagagcagc
tactggagggctgcgcgggcctgcctgggctgccccatccgctgtggagccctgctgctg
ctgtcctgctacttctacttctccatccgagacaaggctggcctgcccctcccctggatg
ctggccctcctgggcctctcgcaggccctaaacatcctcctgggcctccagcacctggcc
ccagctgaagtctctgcaatctgtgaaaaaaggaacttcaacgtggctcatggactggcc
tggtcttattacatcgggtacctgcggctgatcctcccagggctccgggctcggatccaa
gcttataatcagcgccacaagaacgtactcgggggcatagggaaccaccggctgcacatc
ctcttcccgttggactgtggggtgcccgatgacctgagcgtggctgaccccaacattcgc
ttcctgcacgagctgccccagcaaagtgccgaccgtgctggcatcaagggccgggtgtac
accaacagcatctatgagcttctggagaacgggcagccggcaggcgtctgtgtcctgggg
tacgccactcccttgcagaccttgttcgccatgtcacaggatggccgcgctggcttcagc
cgggaggatcggctcgagcaggccaaactcttctgccggaccctcgaagacatcctggca
gatgcgcctgaggctcagaacaactgccgcctcattgtctaccaggaacccacagaggga
ggcagcttctccctgtcgcaggagattctccggcaccttcggcaggaggaaagggaggtt
accatgggcagtgcggagacctcagtggtgcccacttcctccacgctgtcccaagagcct
gagctcctcatcagtggcatggaacagcctcttccactccgctcagatatcttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (19)   
   RefSeq(nuc) (9)   
   GenBank (5)   
   EMBL (5)   
3D Structure (5)   
   PDB (5)   
Protein domain (2)   
   Pfam (2)   
All databases (62)   

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