KEGG   Sus scrofa (pig): 100294703
Entry
100294703         CDS       T01009                                 
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100294703 (KDM2A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100294703 (KDM2A)
   04121 Ubiquitin system [BR:ssc04121]
    100294703 (KDM2A)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100294703 (KDM2A)
Enzymes [BR:ssc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     100294703 (KDM2A)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    100294703 (KDM2A)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     100294703 (KDM2A)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100294703 (KDM2A)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     100294703 (KDM2A)
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8 LRR_4 Cupin_1
Other DBs
NCBI-GeneID: 100294703
NCBI-ProteinID: NP_001153562
UniProt: C3RZA6
Position
2:complement(5238690..5357799)
AA seq 1162 aa
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDRGPRRLSNRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSTSDSSRGSHNGQVWDSQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELASSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGDEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq 3489 nt   +upstreamnt  +downstreamnt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaagggaaaagaacttttgacttg
gaagagaaactccacaccaacaaatataatgcaaattttgttacttttatggaaggaaaa
gattttaatgtagagtatatccagcgtggtggcttaagagaccctctgattttcaagaat
tctgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgtatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgactatggctcagtggacacgctactatgagaccccagaggaggagcgagaaaaactc
tataatgtcatcagcctagagttcagccataccaggctggagaacatggtgcagaggccg
tccacggtggatttcattgactgggtagacaacatgtggccaaggcatttgaaggaaagt
cagaccgaatcaacaaacgcgatcttggagatgcagtaccctaaagtgcagaagtactgt
ctgatgagtgttcgaggctgctatactgacttccatgtggattttggtggtacttctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcccacagacacattagtgtttggaggcaattttttg
catagcttcaatatccccatgcagttaaaaatctataacattgaagatcggacacgggtt
ccaaataagttccgctatccgttctactatgagatgtgttggtatgtgctggagcgctat
gtgtactgcataaccaaccgttcccacctaactaaggaatttcagaaagagtcccttagc
atggatttggagttaaatgggttggagtccggaaatggggatgaggaagcggtagatcga
ggaccccggcgcttgagcaataggcgttctgttctcactagccctgtagccaatggggtc
aacctggattatgatggactgggtaaaacctgccgaagtcttccaagtctgaagaaaact
ttgtctggggattcaacctctgactctagccggggctcccacaatggacaagtgtgggat
tcccaatgtagcccccggaaggacaggcaggtgcatctgacccattttgagcttgaaggc
cttcgttgccttgtagataaattggagtctctgccactgcacaagaaatgtgtccctaca
gggatagaagacgaagatgctctcattgctgatgtgaagattttgctggaggagcttgcc
agcagtgatcccaagttagctctcacaggagttcctatagtacagtggccaaaaagggat
aagcttaaattccccacccggccaaaggtgcgggttcctaccatccccattacaaagcct
cacactatgaaaccagctccacggttaacacctgtgaggccagctgctgcctcccccata
gtgtcaggagccaggcggagacgagtgcgatgtcgaaaatgcaaggcctgtgtgcaagga
gagtgtggcgtttgccactactgcagggacatgaagaagttcgggggacctggtcgtatg
aagcagtcctgtgtccttcggcagtgcttggcacccagactgcctcactcggtcacgtgt
tccctctgtggagaggtggatcagaatgaggagacgcaggactttgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ttgcttaacgaggaattgccaaattgctgggagtgtccaaagtgctaccaggaagacagc
tcagagaaggcccagaagcggaaaatggaagagagtgatgaagaagccgtgcaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacgcccccgcctcactcgcccacc
tccatgctgcagctcatccacgacccggcctccccccggggcgtggtgactcggtcatcc
cctggggccggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctacggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaacctgcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccccagcgtggggacgaggaggggctggggggagatgaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgtgacaagagactttggacaaaaattgacttgagtagatgtaaggct
attgtaccccaggctctcagtggcatcatcaagaggcagccagtcagcctcgacctcagt
tggaccaacatctccaaaaaacaactgacgtggctcgtcaacaggctgccagggctgaaa
gacctcctcctagcaggctgttcctggtctgcagtctctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccaccggctgataagccaggtcaggacaatcgtagcaagctccggaac
atgactgacttccggctggcaggcctcgacatcacggatgccacgcttcgcctcatcatt
cgccacatgcccctcctgtctcgactcgacctcagtcactgcagccacctgacggatcag
tcctccaatctgctcactgctgtcgggtcttccactcgttactccctcacagagctcaac
atggcaggttgcaataaattgacagaccagaccctgatctacctacggcgcatcgccaac
gtcaccttgattgaccttcgaggatgcaagcagatcactcgaaaagcctgcgagcacttc
atctcagacttatccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (16)   
   RefSeq(nuc) (6)   
   GenBank (5)   
   EMBL (5)   
Protein domain (9)   
   Pfam (9)   
All databases (73)   

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