KEGG   Sus scrofa (pig): 100302022
Entry
100302022         CDS       T01009                                 
Symbol
CLDN9
Name
(RefSeq) claudin-9
  KO
K06087  claudin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04514  Cell adhesion molecules
ssc04530  Tight junction
ssc04670  Leukocyte transendothelial migration
ssc05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100302022 (CLDN9)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100302022 (CLDN9)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100302022 (CLDN9)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    100302022 (CLDN9)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100302022 (CLDN9)
   04147 Exosome [BR:ssc04147]
    100302022 (CLDN9)
Cilium and associated proteins [BR:ssc03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100302022 (CLDN9)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100302022 (CLDN9)
  Exosomal proteins of colorectal cancer cells
   100302022 (CLDN9)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM_230_134 TMEM100
Other DBs
NCBI-GeneID: 100302022
NCBI-ProteinID: NP_001155119
UniProt: C3VMK6
Position
3:complement(39172731..39181827)
AA seq 217 aa
MASAGLELLGMSLAVLGWLGTLVCCALPLWKVTAFIGNSIVVAQVVWEGLWMSCAVQSTG
QMQCKVYDSLLALPQDLQAARALCVVALLLALLGLLVAITGAQCTTCVEDEGAKARIVLT
AGVVLLLSGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAASALLMLGGGL
LCCTCPPPQIDRPRGPRLGYSIPSRSGASGLDKRDYV
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcttcagctggccttgagctcctgggcatgagcctggctgtgctgggctggctgggg
accctggtgtgctgcgccctgcccctgtggaaggtgaccgccttcatcggcaacagcatc
gtggtggcccaggtggtctgggaggggctgtggatgtcctgcgcggtgcagagcacaggc
cagatgcagtgcaaggtgtacgactcgctgctggcactgccccaggacctgcaggcggcc
cgcgccctctgcgtcgtcgccctcctgctggccctgctcggcctgctggtggccatcacg
ggcgcccagtgcaccacctgcgtggaggacgaaggcgccaaggcccgcattgtgctcacg
gcgggggtggtcctcctcctgtcgggcatcttggtgctgatccccgtgtgctggacggcg
cacgccatcatccaggacttctacaaccccctggtggccgaggccctcaagcgggagctg
ggagcctccctctacctcggctgggcggcgtctgccctgctcatgctgggcgggggcctc
ctctgctgcacatgccccccgccccagatcgaccggccccggggaccgaggctgggctac
tctatcccctcccgctcgggcgcgtctgggctggacaagagggactatgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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