KEGG   Sus scrofa (pig): 100381266
Entry
100381266         CDS       T01009                                 
Symbol
CALR
Name
(RefSeq) calreticulin precursor
  KO
K08057  calreticulin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04141  Protein processing in endoplasmic reticulum
ssc04145  Phagosome
ssc04148  Efferocytosis
ssc04612  Antigen processing and presentation
ssc05142  Chagas disease
ssc05163  Human cytomegalovirus infection
ssc05166  Human T-cell leukemia virus 1 infection
ssc05168  Herpes simplex virus 1 infection
ssc05169  Epstein-Barr virus infection
ssc05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100381266 (CALR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100381266 (CALR)
   04148 Efferocytosis
    100381266 (CALR)
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    100381266 (CALR)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100381266 (CALR)
   05170 Human immunodeficiency virus 1 infection
    100381266 (CALR)
   05168 Herpes simplex virus 1 infection
    100381266 (CALR)
   05163 Human cytomegalovirus infection
    100381266 (CALR)
   05169 Epstein-Barr virus infection
    100381266 (CALR)
  09174 Infectious disease: parasitic
   05142 Chagas disease
    100381266 (CALR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ssc03110]
    100381266 (CALR)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:ssc04091]
    100381266 (CALR)
Chaperones and folding catalysts [BR:ssc03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   100381266 (CALR)
Lectins [BR:ssc04091]
 Calnexin / calreticulin
  100381266 (CALR)
SSDB
Motif
Pfam: Calreticulin
Other DBs
NCBI-GeneID: 100381266
NCBI-ProteinID: NP_001167604
Ensembl: ENSSSCG00000013746
UniProt: P28491
Position
2:complement(66098263..66102074)
AA seq 417 aa
MLLPVPLLLGLVGLAAAEPTIYFKEQFLDGDGWTDRWIESKHKPDFGRFVLSSGKFYGDQ
EKDKGLQTSQDARFYALSARFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPDGLDQT
DMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDN
TYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAVKPEDWDERAKIDDPTDSKPEDWDKPE
HIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYS
PDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDK
QDEEQRLKEEEEEKKRKEEEEVDKEDEEDKDEDEEEEDEKEEEEEEDAAAGQAKDEL
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgctgctcccagtcccactactgctcggccttgtcggcctggccgccgctgaacccact
atttacttcaaggagcaatttctggacggagacgggtggactgatcgctggattgaatcc
aaacacaaaccggattttggcagattcgttctcagttccggcaaattctacggtgaccag
gagaaagataaagggctacagacaagccaggatgcccggttttacgctctgtcggccaga
tttgagcccttcagcaacaagggtcagacgctggtagtgcagttcacggtgaaacacgaa
cagaacatcgactgtgggggtggatacgtgaagctgtttccagatggtttggaccagaca
gacatgcatggagactccgaatacaacatcatgtttggcccggacatctgtggccctggc
accaagaaagttcatgtcatcttcaactacaagggcaagaacgtgctcatcaataaggat
atccgttgcaaggatgatgaattcacacacctgtacacactgattgtgcggcccgataat
acttatgaggtgaagattgacaacagtcaggtggagtcaggctccttggaggacgattgg
gacttcttgccgcctaagaagataaaggatcctgatgctgtgaagcctgaagactgggac
gagcgagccaaaattgatgaccctacagactccaaacctgaggactgggacaagcctgaa
cacattcctgaccctgatgctaagaagcccgaagactgggatgaagagatggatggagag
tgggaaccgccagtgatacagaacccagagtacaagggtgagtggaagcccaggcagatt
gacaaccccgattacaagggcacttggatccacccagaaatagacaaccctgagtactcc
cctgatagcaacatctatgcctatgaaaactttgctgtgctgggcctggatctctggcag
gtcaagtctggtaccatctttgacaacttcctcattaccaacgatgaggcctacgctgag
gagtttggcaacgagacatggggtgttacaaaggcagcagaaaagcaaatgaaagacaag
caggatgaagagcagaggctaaaggaggaggaggaggagaagaagcgcaaggaagaggag
gaggtagacaaggaagacgaggaggacaaggatgaggatgaggaggaggaggatgagaag
gaggaagaggaggaggaagatgctgccgctggccaggccaaggatgagctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (39)   

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