KEGG   Sus scrofa (pig): 100462748
Entry
100462748         CDS       T01009                                 
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04136  Autophagy - other
ssc04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100462748 (ATG4C)
   04136 Autophagy - other
    100462748 (ATG4C)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    100462748 (ATG4C)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100462748 (ATG4C)
   03029 Mitochondrial biogenesis [BR:ssc03029]
    100462748 (ATG4C)
Peptidases and inhibitors [BR:ssc01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   100462748 (ATG4C)
Membrane trafficking [BR:ssc04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    100462748 (ATG4C)
Mitochondrial biogenesis [BR:ssc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100462748 (ATG4C)
SSDB
Motif
Pfam: Peptidase_C54 ATG4_LIR
Other DBs
NCBI-GeneID: 100462748
NCBI-ProteinID: NP_001177213
Ensembl: ENSSSCG00000003816
UniProt: D7RA23
Position
6:complement(149560318..149691959)
AA seq 458 aa
MEATGTDEVDKLKTKFVSAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDEDKLLP
ARSGCTIKDHVIAGNVEEFRKDFISRIWLTYREEFPQLEGSALTTDCGWGCTLRTGQMLL
AQGLVLHFLGRAWTWPDALNIENSDSESWTSNTAKKFTASFEASLSGERELKTPTISLKE
TIGRYSDDREKQNEIYHRKIISWFGDSPLTLFGLHQLIECGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLQGITIYVAQDCTVYSSDVIDKQCASMAPDNTDDKAVIILVPVRLGGE
RTNADYLDFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKSSSKEKYPLFTFVN
AHSRDYDFTSTTTNKEDLFSEDEKKRLNRFSTEEFVLL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggaggccacaggaacagatgaagttgacaagctaaaaactaaatttgtatctgcttgg
aacaacatgaaatacagttgggtgttgaaaacaaagacatattttagtagaaattcccct
gtgttattgcttggaaagtgttaccattttaaatatgaagatgaagataaactgttacct
gcaagatcaggatgtacaatcaaggatcatgtaattgcgggaaatgtggaagaatttcgt
aaagatttcatttcaagaatatggcttacctacagggaagaatttcctcaactagaaggc
tcagctttgacaacagactgtggttggggctgtacattaagaactggccagatgctgctg
gctcaaggccttgtactacactttcttggtagagcttggacctggcctgatgctttgaac
attgaaaattcagactctgaatcatggacttccaacactgcaaaaaagtttactgcatca
tttgaagcatcgctttcaggggaaagagaactcaaaaccccaacaatttctctgaaggaa
acaattgggagatactctgatgatcgtgaaaagcaaaatgaaatttatcacaggaaaatc
atctcttggtttggtgattcccccttgactctctttggtctgcatcagctaatagaatgt
ggaaagaagtctgggaaaaaagctggagattggtatggaccggctgtggttgctcacatt
ttaagaaaagcagttgaagaagcaagacaccctgatttacaagggataacaatttatgtt
gctcaagattgtacagtttacagttctgatgtaattgataaacagtgcgcttccatggcc
cctgataatacagatgacaaagctgttattattctagttcctgttagacttggtggagaa
agaaccaatgccgactacttagattttgtaaagggtattttaagccttgaatattgtgtg
ggtattattggtggcaaacctaaacagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgcccttctcccaaaaagatgtcatttcgaaaaatggatcct
agctgtacaataggattttactgtcgaaatgttcaggacttcaaacgagcttctgaagaa
atcactaagatgctgaaaagttcttctaaggagaaatatcccttatttacttttgtaaat
gctcattccagagactatgattttacatctactacaaccaataaagaagaccttttctca
gaggatgaaaagaaaagattaaacagatttagcacagaagagtttgtcttgctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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