KEGG   Sus scrofa (pig): 100462754
Entry
100462754         CDS       T01009                                 
Symbol
MAP1LC3B
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3B
  KO
K10435  microtubule-associated protein 1 light chain
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04137  Mitophagy - animal
ssc04140  Autophagy - animal
ssc04216  Ferroptosis
ssc04371  Apelin signaling pathway
ssc04621  NOD-like receptor signaling pathway
ssc05014  Amyotrophic lateral sclerosis
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    100462754 (MAP1LC3B)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100462754 (MAP1LC3B)
   04137 Mitophagy - animal
    100462754 (MAP1LC3B)
  09143 Cell growth and death
   04216 Ferroptosis
    100462754 (MAP1LC3B)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100462754 (MAP1LC3B)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    100462754 (MAP1LC3B)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100462754 (MAP1LC3B)
   05022 Pathways of neurodegeneration - multiple diseases
    100462754 (MAP1LC3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100462754 (MAP1LC3B)
   03029 Mitochondrial biogenesis [BR:ssc03029]
    100462754 (MAP1LC3B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    100462754 (MAP1LC3B)
Membrane trafficking [BR:ssc04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    100462754 (MAP1LC3B)
Mitochondrial biogenesis [BR:ssc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    100462754 (MAP1LC3B)
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     100462754 (MAP1LC3B)
SSDB
Motif
Pfam: ATG8 APG12 Rad60-SLD
Other DBs
NCBI-GeneID: 100462754
NCBI-ProteinID: NP_001177219
Ensembl: ENSSSCG00000002655
UniProt: D7RA29 A0A4X1T8W3
Position
6:complement(1919879..1941069)
AA seq 125 aa
MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM
SELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPICEVYESEKDEDGFLYMVYASQETFG
MKLSV
NT seq 378 nt   +upstreamnt  +downstreamnt
atgccgtccgagaaaaccttcaaacagcgccgaaccttcgaacagagagtagaagatgtc
cggctcatccgagagcagcatcctaccaaaatcccggtaataatagaacgatacaaaggt
gagaagcagcttccagtcctggataaaacgaaattcctggtgcctgatcatgtcaacatg
agtgagctcatcaagataattagaaggcgcttgcagctcaatgctaaccaagccttcttc
ctgttagtgaacggacatagcatggtgagtgtgtccacaccgatttgtgaggtgtacgaa
agcgagaaggatgaagatggattcctgtacatggtatatgcctctcaggagactttcgga
atgaagttgtctgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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