KEGG   Sus scrofa (pig): 100499507
Entry
100499507         CDS       T01009                                 
Symbol
AGO4
Name
(RefSeq) protein argonaute-4
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100499507 (AGO4)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100499507 (AGO4)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100499507 (AGO4)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    100499507 (AGO4)
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     100499507 (AGO4)
   microRNA pathway
    RISC loading complex
     100499507 (AGO4)
SSDB
Motif
Pfam: Piwi ArgoMid PAZ ArgoN ArgoL1 ArgoL2
Other DBs
NCBI-GeneID: 100499507
NCBI-ProteinID: NP_001181901
Ensembl: ENSSSCG00000003629
UniProt: D9YJ47
Position
6:91967499..92013030
AA seq 861 aa
MEAVGPGPPTSLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVNIEPEKRPRRV
NREVVDTMVRHFKIQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKV
SVQWVSVVSLQLLLEALAGHLNEVPDDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYH
PLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPIIEFMCEVLDIQNINEQTKPL
TDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQ
YFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATAR
SAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNEMTELTGRVLPAPMLQYGGRNKTVA
TPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSFTDQLRKISKDAGMPIQGQ
PCFCKYAQGADSVEPMFKHLKMTYVGLQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQ
VKNVVRTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKK
PSIAAVVGSMDGHPSRYCATVRVQTSRQEISQELLYSQEVIQDLTNMVRELLIQFYKSTR
FKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLFCA
DKTERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYQVLWDDNCFTADE
LQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSGQSNGRD
PQALAKAVQIHHDTQHTMYFA
NT seq 2586 nt   +upstreamnt  +downstreamnt
atggaagcagtgggacccggacctccaactagcctgtttcagccacctcgtcgtcctggc
cttggaactgtcggaaaaccaattcgactgttagccaatcattttcaggttcagattcct
aaaatagatgtgtatcattatgatgtgaatatcgaaccagaaaaacggcctcgtagagtc
aacagggaggtagtagatacaatggtgcggcactttaagatccaaatatttggtgatcgg
cagcctggctatgatggcaaaagaaatatgtacacagcacatccactgccaattggacgg
gatagggtcgatatggaagtgacccttccaggcgagggtaaagaccagacctttaaagtg
tctgttcagtgggtgtcagttgtgagtcttcagttgcttttagaagctttggccgggcac
ttgaatgaagtcccagatgactcagttcaagcacttgatgttatcacaagacaccttccc
tccatgaggtacactccagtgggtcgctcctttttctcacctcctgaaggttattaccat
cctctgggaggaggtagagaggtttggtttggctttcatcagtctgtgagacctgccatg
tggaatatgatgctcaatattgatgtatctgcaactgctttctacagggctcagcctatc
attgagttcatgtgtgaggttttagacattcagaacatcaatgaacagaccaaacctcta
acagactcccagcgtgtcaaatttaccaaagaaatcagaggtcttaaagttgaggtgacc
cactgtggacagatgaaacgcaaatatcgagtttgtaatgtgactagacggccagccagt
catcaaacttttcccttacagctagaaaacggtcaagctatggaatgtacagtagctcaa
tattttaagcaaaagtatagtctgcagctgaaatacccccatcttccctgtctccaagta
ggacaagaacaaaagcatacatacttgccacttgaggtctgtaatattgtggcagggcag
cgatgtataaagaagctcacggacaatcagacttccacgatgatcaaagccacagcacga
tccgctcctgacagacaggaagaaatcagtagactggtgaagagtaacagcatggtgggt
ggacctgatccataccttaaagagtttggtattgttgtccacaatgaaatgacagagctc
acaggcagggtccttccagcaccaatgctgcagtatggaggccggaataaaacggtagcc
acacccaaccagggtgtctgggacatgcgaggaaagcagttttatgctggcattgaaatt
aaagtttgggcagttgcttgttttgcgcctcagaaacaatgtagggaagatttactaaag
agtttcactgaccaactccgtaaaatctctaaggatgcaggaatgcccatccagggtcaa
ccatgtttttgcaagtatgcccaaggtgcagacagcgtggagcccatgtttaaacacctg
aaaatgacatatgtgggcctacagctaatagtggttattttgcctggaaagacaccagta
tatgcggaggtgaaacgtgttggagatactctcttgggtatggctacacagtgtgtccag
gtaaaaaatgtcgtgaggacttcacctcagaccctttctaacctttgcctgaagataaat
gcaaagcttggaggaatcaacaatgtgcttgtacctcatcaaaggccttcggtgttccag
cagcctgtcatcttcctgggagcagatgtcacgcaccccccagcaggggatggcaagaag
ccttccatcgccgctgttgttggcagtatggatggccaccccagccggtactgtgctact
gttcgggtgcagacctctcgccaggagatctcccaggagctcctctatagtcaggaggta
atccaggacctcactaacatggttcgagagctgctgattcagttctacaaatccacacgc
ttcaaacccactcggatcatctattaccgtggaggggtatccgagggacagatgaaacag
gtagcttggccagaactaatagcaattcgaaaagcatgtattagcttggaagaagattat
cggccaggaataacctatattgtggttcagaaaagacatcacacaagactcttctgtgcg
gataaaacagaaagggtggggaaaagtggcaacgtaccagcaggcactactgtggacagc
accatcacacatccatctgagtttgacttttacctctgtagtcatgcaggaattcaggga
accagccgtccgtcacattaccaggtcttgtgggatgacaactgcttcactgcagatgag
ctccagttactaacttaccagctgtgtcatacttatgtgcggtgcacacgctcagtctct
attccagcccctgcctattatgcccggcttgtagcattcagggcacggtatcatctggtg
gataaagatcacgacagtgcggaaggcagtcacgtgtcaggacagagcaacggccgagat
cctcaggccttggccaaagccgtgcagatccaccatgatacccagcacacgatgtatttt
gcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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