KEGG   Sus scrofa (pig): 100499510
Entry
100499510         CDS       T01009                                 
Symbol
AGO1
Name
(RefSeq) protein argonaute-1
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100499510 (AGO1)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100499510 (AGO1)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100499510 (AGO1)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    100499510 (AGO1)
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     100499510 (AGO1)
   microRNA pathway
    RISC loading complex
     100499510 (AGO1)
SSDB
Motif
Pfam: Piwi ArgoMid PAZ ArgoN ArgoL1 ArgoL2
Other DBs
NCBI-GeneID: 100499510
NCBI-ProteinID: NP_001181905
Ensembl: ENSSSCG00000003630
UniProt: D9YJ44
Position
6:92038104..92076477
AA seq 857 aa
MEAGPSGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKRNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWLAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggaagcgggaccctcgggagcagctgcgggcgcctacctgccccccctgcagcaggtg
ttccaggcacctcgccggcctggtattggcactgtggggaaaccaatcaagctcctggcc
aattactttgaagtggacatccctaagattgacgtctaccactacgaggtggatatcaag
ccggataagtgtcctcgcagagtcaaccgggaagtggtggaatacatggtccagcatttc
aagcctcagatctttggtgatcgcaagcccgtatatgatggaaagaggaatatttacact
gtcacagcgctgcccattggcaatgaacgggttgactttgaggtgacaatccctggggaa
gggaaggatcgaatcttcaaggtctccatcaagtggctagccattgtgagctggcgcatg
ctgcatgaggccttggtcagtggccagatccctgttcccctggagtctgtgcaagccctg
gatgtggccatgaggcacctggcatccatgaggtacacccctgtgggccgctccttcttc
tcaccgcctgagggctactaccacccgctggggggtgggcgcgaggtctggttcggcttt
caccagtctgtgcgccctgccatgtggaagatgatgctcaacattgatgtctcagccact
gccttctacaaggcgcagccagtgattgagttcatgtgtgaggtgctggacatcaggaac
atagatgagcagcccaagcccctcacggactctcagcgtgtacgcttcaccaaggagatc
aagggcctgaaggtggaagtgacccactgtggacagatgaagaggaaataccgtgtgtgt
aatgttacccgccgccctgccagccatcagacgtttcccttgcagctggagagtggacag
actgtggagtgcacagtggcacagtatttcaagcagaaatataacctccagctcaaatat
ccccacctgccctgtctgcaggttggccaggaacaaaagcatacctaccttcccttagag
gtctgtaacattgtggctgggcagcgctgcattaagaagctgactgacaaccagacttca
accatgataaaggccacagctaggtcggccccagacagacaggaggagatcagccgcctg
atgaagaatgccagctacaacctagatccctacatccaagaatttgggatcaaggtgaag
gatgacatgacggaagtgacagggcgagtgctgccggcgcccatcttgcagtacggcggc
cggaaccgggccattgccacacccaatcagggtgtctgggacatgcgggggaagcagttc
tacaatggaattgagatcaaagtctgggccatcgcttgcttcgcaccccaaaaacagtgt
cgagaagaggtgctcaagaacttcacggaccagctgcggaagatttccaaggatgcaggg
atgcctatccagggccagccttgcttttgcaaatatgcgcagggggcagacagcgtggag
cccatgttccggcatctcaagaacacctactcagggctgcagctcattatcgtcatcctg
ccagggaagacgccagtgtatgctgaagtgaaacgtgttggagatacactcttgggaatg
gctacacagtgtgtgcaagtgaagaatgtggtgaagacctcacctcagactctgtccaac
ctctgcctgaagatcaatgtcaagcttggtggcatcaacaacatcctagtcccacaccag
cgttctgccgtctttcaacaaccagtgatattcctgggagcggatgttacacaccccccg
gcaggggacgggaaaaagccttctatcacagcagtcgtaggtagtatggatgcccacccc
agccgttactgtgctactgtgcgggtgcagcgaccgcggcaggagatcattgaagattta
tcctacatggtacgtgagctgctcatccagttctacaagtccacccgcttcaagcctacc
cgcatcatcttctaccgagatggggttcctgaaggccagctcccccagatcctccactat
gagctgctggccattcgtgatgcctgcatcaaactggaaaaggactaccagcctgggatc
acttatattgtggtgcagaaacgccatcatacccgccttttttgtgctgacaagaatgag
cgaattgggaagagtggtaacatcccagctgggactactgtggacaccaacatcacccac
ccatttgagtttgacttctatctgtgcagccacgcaggcatccagggcaccagccgacca
tcccattactatgtcctttgggatgacaaccgtttcacagcggatgagctccagatcttg
acgtaccagctgtgccacacttatgtacgatgcacacgctccgtctcaattccagcacct
gcctactatgcccgcttggtggctttccgggcaagataccacctagtggacaaggagcat
gacagtggagaggggagccacatatcggggcagagcaatgggcgggacccccaggccctg
gccaaagccgtgcaggttcaccaggatactctgcgcaccatgtacttcgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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