KEGG   Sus scrofa (pig): 100499567
Entry
100499567         CDS       T01009                                 
Symbol
HES1
Name
(RefSeq) transcription factor HES-1
  KO
K06054  hairy and enhancer of split 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03460  Fanconi anemia pathway
ssc04330  Notch signaling pathway
ssc04950  Maturity onset diabetes of the young
ssc05165  Human papillomavirus infection
ssc05169  Epstein-Barr virus infection
ssc05200  Pathways in cancer
ssc05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100499567 (HES1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100499567 (HES1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100499567 (HES1)
  09162 Cancer: specific types
   05224 Breast cancer
    100499567 (HES1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100499567 (HES1)
   05165 Human papillomavirus infection
    100499567 (HES1)
  09167 Endocrine and metabolic disease
   04950 Maturity onset diabetes of the young
    100499567 (HES1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100499567 (HES1)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100499567 (HES1)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    100499567 (HES1)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     100499567 (HES1)
SSDB
Motif
Pfam: Hairy_orange HLH
Other DBs
NCBI-GeneID: 100499567
NCBI-ProteinID: NP_001182160
Ensembl: ENSSSCG00000026362
UniProt: E0A234
Position
13:131135970..131137865
AA seq 280 aa
MPADIMEKNSSSPVAATPASVNTTPDKPKTASEHRKSSKPIMEKRRRARINESLSQLKTL
ILDALKKDSSRHSKLEKADILEMTVEHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMTYPGQPHPALQAPPPPPPGPGGPQHAP
FAPPPPLVPIPGGAAPPPGGAPCKLGSPAGEAAKVFGGFQVVPAPDGQFAFLIPNGAFAH
SGPVIPVYTSNSGTSVGPNAVSPSSGPSLTADSMWRPWRN
NT seq 843 nt   +upstreamnt  +downstreamnt
atgccagctgatataatggagaaaaattcctcgtccccggtggctgctaccccagccagt
gtcaacacgacaccggataaaccaaagacagcatctgagcacagaaagtcatcaaagccc
atcatggagaaaagacgaagagcaagaataaatgaaagtctgagccagctgaaaacactg
attttggatgctcttaaaaaagatagctcgaggcattccaagctggagaaggcggacatt
ctggaaatgacagtggagcacctccggaacctgcagcgggcgcagatgacggccgcgcta
agcacagacccgagcgtgctggggaagtaccgcgccggcttcagtgagtgcatgaacgag
gtgacccgcttcctgtccacgtgcgagggcgttaacaccgaggtgcgcacccggctgctc
ggccacctggccaactgcatgacccagatcaacgccatgacctaccctgggcagccgcac
ccagccttgcaggcgccgccaccgcccccgccaggacccggaggtccgcagcacgcgccg
ttcgcgccgccaccgccactggtgcccatccccgggggtgcggcgccccctcccggcggc
gcgccctgcaagctgggcagcccggctggagaggcggcaaaggtattcggcggcttccag
gtggtcccggctcccgatggccagtttgccttcctcatccccaacggggccttcgctcac
agcggcccggtcatcccagtctacaccagcaacagcgggacctccgtgggccccaacgca
gtgtcgccttccagcggcccctcgctcacggcggactccatgtggaggccttggcggaac
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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