KEGG   Sus scrofa (pig): 100512562
Entry
100512562         CDS       T01009                                 
Symbol
CDHR1
Name
(RefSeq) cadherin-related family member 1
  KO
K16501  cadherin-related family member 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    100512562 (CDHR1)
Cell adhesion molecules [BR:ssc04515]
 Cadherins
  Cadherin related
   100512562 (CDHR1)
SSDB
Motif
Pfam: Cadherin Big_9 Cadherin_4 VWA_3_C PKD DUF2460
Other DBs
NCBI-GeneID: 100512562
NCBI-ProteinID: XP_003133142
Ensembl: ENSSSCG00000010348
UniProt: A0A4X1SEX3 A0A5G2R7H5
Position
14:85429506..85455823
AA seq 856 aa
MGRGPRAILALGLLFLRLAQANFAPHFFDNGVGSTNGNMALFSLPEDTPVGSHVYTLNGT
DPEGNPVSYHISFDPSARSVFSVDPNFGTITLVEELDREREDEIEATISISDGLNLVAEK
VTILVTDANDEAPRFIQEPYVVQVPEDILAGSSIAKVHAVDRDTGSGGSVTYFLQNPHST
KFAMDRHSGVLRLQPGATLDYEKARTHFVTVVAKDGGGRLRGADVVFSATATVTVNVEDV
QDMAPVFVGTPYYGYVYEDTLPGSEVLTVVAMDGDQGKPNRILYSLMNGSDGAFEINETS
GAIYVMQSPAQLRRDVYELHVQVTEVSSAGTPAAQAMVPVTIRIVDLNNHPPTFYGESGP
QNRFELSMYEHPPQGEILRGLKITVNDSDQGANAKFNLRLVGPGGIFRVVPQTVLNEAQV
TIIVENSAAIDFEKFKVLTFKLLAIEVNTPEKFSSTADVVIQLLDTNDNVPKFTSHYYVA
RIPENAPGGSNVVAVTAVDPDTGPWGEVKYSIYGSGADYFLIHSSSGMIYTQPWASLDAE
ATTRYNFYVKAEDMEGKYSLAEVFVTLLDVNDHYPQFGKRVQEKTMVLGTPVKIEATDQD
AEEPNNLVDYSITHAEPANVFDIDAHTGEIRLKNSIRSLDALHNITPNGDRTWSLEVQAK
DRGSPSFSTTALLRIDIVDTEMQSRSPMAAFLMQTKDNPMKAVGVLAGIMAIIVAITVLI
STASFWRNKKSNKVLPVRRVLRKRPSPAPRTVRIKWLKFGRTKAADKFVLREDRPNENCN
NNSLGSTPPPTAPAPPPPPSMGPAHWTVPTVSGSLAPRQPPRSPKPKAVGSPVQSALVSE
LRQKFEKKNVHNKAYF
NT seq 2571 nt   +upstreamnt  +downstreamnt
atggggcgcggcccgcgggccatactggccctgggactgctattcctccgcctggcccaa
gccaacttcgccccccacttcttcgacaacggggtgggcagcaccaacggaaacatggcc
cttttcagcctcccggaggacacccctgtaggctctcatgtgtacaccctgaatgggaca
gaccctgagggaaaccctgtctcctaccacatcagctttgaccccagtgctagaagcgtc
ttttctgttgaccccaactttggaaccatcaccctggttgaagagctggacagagagagg
gaggatgagattgaagccactatcagcatttctgacggcctgaatctggtggcagaaaaa
gtcacgattctggtgactgatgccaatgatgaggcacccaggttcatccaggagccctat
gttgtccaggttcccgaggacatacttgccgggagcagtatcgccaaggtccatgcagtg
gacagggacacaggttctggagggagtgtcacctacttcctgcagaatccacactccacc
aaatttgccatggaccgccacagcggtgtgctgcgcctccagcctggggccaccctggac
tatgagaaggcccggacccattttgtcactgtggttgccaaggatggtggagggcggctg
cgaggggccgacgtggtgttctcagccaccgccacggtcacggtcaatgtggaggatgtg
caggacatggcccctgtcttcgtgggcacaccttactatggctatgtgtacgaggacacc
cttccgggctctgaggtcctgacggtggtcgccatggatggagatcagggcaaacccaac
cgcattctctacagcctcatgaacgggagcgatggtgcctttgaaattaatgagacgtct
ggagccatttacgtcatgcagagccctgcccagctccggagagacgtgtatgagctgcat
gtacaggtgactgaggtcagctctgcagggaccccagctgcccaggccatggtgcctgtc
accatcaggatcgtggacctcaacaaccatccaccaacattctatggagagagtggaccc
cagaacagatttgagttgtccatgtatgagcacccgccccagggggagatcctgaggggc
ctcaagatcactgtcaatgactcagaccagggagccaatgccaaattcaacctacggctg
gtggggcctggaggcattttccgagtggtcccgcagactgtcctgaatgaagcccaagtc
acgatcattgtggagaactcagctgccattgactttgaaaagttcaaagtgttaaccttc
aagctcctggccattgaagtgaacaccccagagaagttcagctctacagcagatgtcgtg
atccagctcctggacaccaacgacaatgtccccaagttcacttcccactactacgttgcc
aggatccccgagaatgccccaggaggctccaatgtggtggctgtcacagccgtggatcca
gacacaggtccctggggtgaagtcaaatactccatctatggatccggggcagactacttc
ctgatccactcatcctctgggatgatctacacccagccctgggccagcctggatgccgag
gccaccaccaggtacaacttctatgtgaaggcagaggacatggagggcaagtacagcctg
gccgaggtgttcgtcacgctgctggatgtcaatgaccactacccccagtttggaaagagg
gtccaggagaagacgatggtgctggggacgccggtgaaaatcgaggccacagaccaggat
gcagaggagcccaacaacctggtggactattccatcacccatgcagagccggccaacgtg
ttcgacatcgatgcacacacgggggagatccggctcaagaactccatccgctctctggat
gccctgcacaacatcacacccaacggggaccgcacctggtccctagaggtgcaggccaag
gaccgtggctccccctcctttagcaccacggccttactcaggattgacattgtagacact
gagatgcagtcccgaagtcccatggctgcctttctgatgcagaccaaagacaaccccatg
aaggccgtgggcgtgctggccggcatcatggccattattgtggccataaccgtcctcata
tccactgccagtttctggcgcaacaagaagtccaacaaggtcctgccagtgcggcgagta
ctccgcaagcggcccagcccggcaccccgcactgtccgcatcaagtggctcaagttcgga
agaaccaaggctgctgacaagtttgtgctcagagaggatcgtcccaatgagaactgtaac
aacaacagcctgggaagcaccccgcccccaacagcccctgctccccctccaccacccagc
atgggcccggcccactggacggtgcctacagtctctggctcgctcgcccctcggcagcct
ccacggtcaccaaaacccaaggctgtgggaagccctgtccagtcagctctggtgtctgag
ctcaggcaaaagtttgagaagaagaatgtgcataacaaggcttacttctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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