KEGG   Sus scrofa (pig): 100513412
Entry
100513412         CDS       T01009                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1
  KO
K05699  actinin alpha 1/4
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04510  Focal adhesion
ssc04520  Adherens junction
ssc04530  Tight junction
ssc04670  Leukocyte transendothelial migration
ssc04810  Regulation of actin cytoskeleton
ssc05146  Amoebiasis
ssc05203  Viral carcinogenesis
ssc05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100513412 (ACTN1)
   04520 Adherens junction
    100513412 (ACTN1)
   04530 Tight junction
    100513412 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100513412 (ACTN1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100513412 (ACTN1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100513412 (ACTN1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100513412 (ACTN1)
  09163 Immune disease
   05322 Systemic lupus erythematosus
    100513412 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100513412 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    100513412 (ACTN1)
   04147 Exosome [BR:ssc04147]
    100513412 (ACTN1)
Membrane trafficking [BR:ssc04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100513412 (ACTN1)
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     100513412 (ACTN1)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100513412 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   100513412 (ACTN1)
  Exosomal proteins of bladder cancer cells
   100513412 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 XisI EF-hand_11 AIF-1 Uds1
Other DBs
NCBI-GeneID: 100513412
NCBI-ProteinID: NP_001229990
Ensembl: ENSSSCG00000020703
UniProt: A0A480J3H1
Position
7:complement(92550132..92644842)
AA seq 887 aa
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDTDDFRACLISMGY
NMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITV
DELRRELPPDQAEYCIARMAPYTGPDAVPGALDYMSFSTALYGESDL
NT seq 2664 nt   +upstreamnt  +downstreamnt
atggaccattatgattcccagcaaaccaacgactacatgcagcccgaagaggactgggat
cgagatctgctcctggacccagcctgggagaagcagcagagaaagacattcacagcatgg
tgcaactcccacctccggaaggcaggcacgcagatcgagaacatcgaggaggacttccgg
gacggcctgaagctgatgctgctgctggaggtcatctcaggtgaacgcctggccaagccg
gagagaggcaagatgagagtgcacaagatttccaacgtcaacaaggccttggacttcata
gccagcaagggcgtcaagctggtgtccataggagccgaagaaatcgtggatgggaacgtg
aaaatgaccctgggcatgatctggaccatcatcctccgctttgccatccaggacatctcc
gtggaagagacttcggccaaggaaggactgctcttgtggtgtcagagaaagacagcccct
tacaagaatgtcaatatccagaacttccacataagctggaaggacggcctgggcttctgt
gccttgatccaccgacaccggcctgagctgattgactatgggaagctgcggaaggatgac
ccactgacaaatctgaacacggccttcgatgtggcagagaagtacctggacatcccgaag
atgctggatgcggaagacatcgtcggaactgcccgtcctgatgagaaagctatcatgact
tatgtatccagcttctaccacgccttctctggagcccagaaggccgagacagcagccaat
cgcatctgcaaggtgctggccgtcaaccaggagaatgagcagctcatggaagactacgag
aagctggccagcgatctgctggagtggatccgccgcaccatcccctggctggagaaccgg
gcgcccgagaacaccatgcatgccatgcagcagaagctggaggacttccgtgactaccgg
cgcctgcacaagccccccaaggtgcaggagaagtgccagctggagatcaacttcaacacg
ctgcagaccaagctgcgcctcagcaaccggcctgccttcatgccctccgagggcaggatg
gtctcggacatcaacaatgcctggggctgcctggagcaggcggagaagggctatgaggag
tggctgctgaatgagatccggaggctggagaggcttgaccacctggcagagaagttccgg
cagaaggcctccatccacgaggcctggacggatggcaaagaggccatgctgcggcagaag
gattacgagacggccaccctctcggagatcaaggccctgctcaagaagcacgaggccttc
gagagcgacctggccgcccaccaggaccgcgtggagcagatcgctgccatcgcgcaggag
ctcaatgagctggactattacgactcacccagtgtcaatgcccggtgccaaaagatctgt
gaccagtgggacaatctgggggccctgacccagaagcggagggaagctctggagcggaca
gagaaactgctggagaccattgaccagctgtacctggagtacgccaagcgggccgcgccc
ttcaacaattggatggagggggccatggaggacctgcaggacaccttcatcgtgcacacc
atcgaggagatccagggactgaccacagcccatgagcagttcaaggccaccctccctgat
gccgacaaggagcgcctggccatcctgggcattcacaatgaggtgtccaagattgtccag
acctaccacgtcaacatggcgggcaccaacccctacacaaccatcacgcctcaggagatc
aatggcaaatgggaccacgtgcggcagctggtgccgcggagggaccaggccctgacggag
gagcatgcccgccagcagcacaacgagaggctacgcaagcagtttggggcgcaggccaat
gtcatcgggccctggatccagaccaagatggaggagatcgggaggatctccatcgagatg
cacgggaccctggaggaccagctcagccacctgcggcagtacgagaagagcattgtcaac
tacaagcccaagatcgaccagctggagggcgaccaccagctcatccaggaggcgctcatc
ttcgacaacaagcacaccaactacaccatggagcacatccgtgtgggctgggagcagctc
ctcaccaccatcgccaggaccatcaatgaggtggagaaccagatcctgaccagggatgcc
aagggcatcagccaggagcagatgaacgagttccgggcctccttcaaccactttgaccgg
aagaagacaggcatgatggacacggatgatttccgcgcctgcctgatctccatgggttac
aacatgggagaggcggaatttgcccgcatcatgagcattgtggaccccaaccgcctgggg
gtagtgacgttccaggccttcatcgatttcatgtcccgtgagacggccgacacggataca
gcagatcaagtcatggcttccttcaagatcctggctggggacaagaattacatcacggtg
gacgagctgcgccgtgagctgccgcctgaccaggccgagtactgcattgcgagaatggcc
ccgtacaccggccccgacgccgtgcccggtgctctggactacatgtccttctccacagcg
ctgtacggcgagagtgacctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (67)   

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