KEGG   Sus scrofa (pig): 100513681
Entry
100513681         CDS       T01009                                 
Symbol
LHX1
Name
(RefSeq) LIM/homeobox protein Lhx1
  KO
K09372  LIM homeobox protein 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100513681 (LHX1)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    100513681 (LHX1)
SSDB
Motif
Pfam: LIM Homeodomain Homeobox_KN SpoIIIAH
Other DBs
NCBI-GeneID: 100513681
NCBI-ProteinID: XP_003131754
Ensembl: ENSSSCG00000017692
UniProt: F2Z531 A0A8D1AEC3
Position
12:38450708..38457583
AA seq 406 aa
MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG
TKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLS
NSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEGGSNENDDQNLGAKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGGNYDFFPQGP
PSSQAQTPVDLPFVPSSGPSGTPLGGLEHPLPGHHPSSEAQRFTDILAHPPGDSPSPEPS
LPGPLHSMSAEVFGPSPPFSSLSVNGGASYGNHLSHPPEMNEAAVW
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggtgcactgtgccggctgcaaaaggcccatcctggaccgcttcctcttgaacgtgctg
gacagggcctggcacgtcaagtgcgtccagtgctgtgaatgtaaatgcaacctgacagag
aagtgcttctcccgggaaggcaagctctactgcaagaacgacttcttccggtgtttcggt
accaaatgcgccggctgcgcgcagggcatctcccccagcgacctggtgcggagagcgcga
agcaaagtgtttcacctgaactgcttcacctgcatgatgtgcaacaagcagctctccacc
ggcgaggagctttatatcatcgatgaaaacaagttcgtctgcaaagaggattacctaagc
aacagcagcgtcgccaaagagaacagcctccactcggccaccacgggcagtgaccccagt
ttgtctccggactcccaagacccgtcgcaggacgacgccaaggactcagagagcgccaat
gtgtcggacaaggaaggcggcagcaatgagaacgatgaccagaacctgggggccaagcgg
agggggccgcgcaccaccatcaaagccaagcagctggagacgttgaaggccgccttcgcc
gctacacccaagcccacgcgccacatccgcgagcagctggctcaagagaccggcctcaat
atgcgtgtcatccaggtctggttccagaacagacgctccaaggaaaggaggatgaaacag
ctgagcgccctgggcgcccgacgccacgccttcttccgcagtccgcgccggatgcggccg
ctcgtggaccgcctggagccgggcgagctcatccccaacgggcccttctccttctacgga
gattaccagagcgagtattacgggcccggaggcaactacgacttcttcccgcaaggtccc
ccgtcctcgcaggctcagaccccagtggacctgcccttcgtgccgtcatccgggccttcc
gggacacccctgggtggcctggagcacccgctgcccggccaccacccgtcgagcgaggcg
cagcggttcaccgacatcctggcgcatcctcccggggactcgcccagcccggagcccagc
ctgcccgggccactgcactcaatgtccgccgaggtcttcggacccagcccgcccttctcg
tcgctgtcggtcaacggcggggcgagctacgggaaccacctgtctcacccccccgaaatg
aacgaggcggccgtgtggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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