KEGG   Sus scrofa (pig): 100513812
Entry
100513812         CDS       T01009                                 
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
  KO
K10631  E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100513812 (TOPORS)
   03036 Chromosome and associated proteins [BR:ssc03036]
    100513812 (TOPORS)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ssc03037]
    100513812 (TOPORS)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100513812 (TOPORS)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100513812 (TOPORS)
  UBL E3 ligases
   100513812 (TOPORS)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    100513812 (TOPORS)
Cilium and associated proteins [BR:ssc03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   100513812 (TOPORS)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-rbx1 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 Rad50_zn_hook zf-RING_4
Other DBs
NCBI-GeneID: 100513812
NCBI-ProteinID: XP_005668133
Ensembl: ENSSSCG00000011004
UniProt: A0A4X1UN45 A0A287AMD1
Position
10:33865967..33878135
AA seq 1049 aa
MQDKGSQQPPGSPLSREEGEAPPPAPALEGRRRSRRVRLRGSCRHRPSFLGRRELATSAP
AGPAPASSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLD
RCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSHNGSFATPDVR
RFRYRTTMTRERSASVYSPSRPLNRRTTTPPDSGVLFEGLGLSARPRDGEISPFMRQIAV
RRPTTADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRL
VPWLKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFI
SFARSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDINVATVSQAPW
DDETPGPSYSSSEQVQASMSSLLNTSDSSDEELVTGRATSQIQGVQTNEDLNNDSDSSSD
NCVIVGFVKPLAERTPELVELSSDSEELGSYEKMETVKTQEQEQSYSSGDSDVSRCSSPR
SVLGKDEQINKGHCDSGTRIKSKKEEKHSTSLSSPRDLSSSIRGDRVYSPYTHRHRRRGR
SRSSDSRSQSRSGHDQKNRRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRR
SQTLSLSSESTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGY
ESSYRRRTLSRAHYSRQSSSPEFRINSSFSERTNARKKNNHSERKYYYYERHRSRSLSST
RSRTASTGPDRTRNEKPGGKRKYKTRHLEGANEMAQPSREFASKVKESHYQKSSSKLDAS
YKNESDSFSDSRSSDRETKHKRRRRRTRSLSVEIVYEGKATDTARHHKKKKKKHKKKHKK
HHGDNASHSPVVITIDSDSDKDSEVKEDVECDPSGPQDPLQSEFLASSLESFETKDVVTI
EDEFGVLSKECDFTTLSNNLNNANKTVDNIPPQAASVEQTLDVREESTFASHLENQSSNG
SIQTELSRQLPSPRTSLMSVSLGRDHDMS
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgcaggataaggggtcgcagcagccgccggggtctccgctgtctcgcgaggagggtgaa
gcgcccccgcccgctccggctcttgagggccggcggagaagtcgccgggttcgccttcgt
gggtcctgccgtcaccgacccagctttctgggccgccgggagcttgccacgagcgcccca
gccgggcctgcaccggcatcctccgagataatggcatcagccgctaaggaatttaaaatg
gacaacttttcacctaaagcaggcactagcaaattgcagcaaacagttccagctgatgca
tctcctgattctaagtgtcctatatgcttggatagatttgataatgtgtcttacttagat
cgctgtttacataagttctgttttcgatgtgtacaggagtggtcaaaaaacaaagctgaa
tgtccactgtgtaaacagccctttgattctattttccattctgtgagggcagaagatgac
ttcaaggagtatgtcctaaggccttcacacaatggttcctttgctactcctgatgttcgg
agattccgctaccgtacaactatgacaagggaacgaagtgcttctgtttattcacctagt
cgtcccttgaatagaagaacaacaactccaccagatagtggagtactatttgaagggtta
ggcctttcagcaagacccagagatggtgaaatttctccattcatgagacagattgcagtg
aggaggccaacaactgcagacgaaagatctttgcggaaaattcaagaacaggatattatt
aattttaggcgaactctttatcgtgctggtgctcgagttagaaatattgaagatggtggt
cgctacagggatatttcagctgaatttttccgtagaaatccagcttgccttcacagatta
gtcccctggttaaaacgtgaactcacggttctctttggagctcatggatctttggtgaat
atcgtccagcacatcatcatgagcaatgttactcgttatgacttggagagtcaggcattt
gtgtctgatttaaggccatttttacttaatcggactgagcattttatacatgaatttatc
agttttgctcgatctccttttaatatggcagcttttgaccagcatgcaaattatgattgc
cctgctccttcatatgaagaaggtagccattctgattcttcagtcataacaatatctcca
gatgaagctgagacccaagagctagatattaatgtagccactgttagtcaagcaccatgg
gatgatgaaactccagggccatcatattcaagctcagagcaggtgcaggcttccatgtct
tcccttttaaatacttctgatagctcggatgaagaacttgtaacaggaagagccacatct
cagatacaaggagtacaaaccaatgaagacctaaataatgacagtgattcttcttcagat
aattgtgttattgttgggtttgttaagccactagctgagaggaccccagaacttgttgaa
ctgtcctctgattctgaggaattaggctcttatgagaaaatggagacagtgaagacacaa
gaacaagaacagtcttacagttctggtgatagtgatgttagcagatgttcatctccaagg
tctgtccttggaaaggatgaacaaataaataaaggtcattgtgattctggtacaagaatc
aaatcaaagaaggaagagaaacactctacatcattgtcctctcccagagacctgagctca
tccatcagaggagacagagtatattccccatatacccacagacacagaaggaggggaaga
tcgagaagttcagattcacgctcccagagtaggagtgggcatgatcagaagaatcgtaga
aagcatcatgggaagaaaagaatgaaaagcaaacgatccagaagcagggagagtagcaga
cctagaggtagaagagacaaaaagaggtcaagaactagagatagcagttggtctagaaga
agccagactctgtctctaagtagtgaaagcacaagcagatcaagatctcgtagcagtgat
catggtaaaagaagatcacggagcagaaatagagatcgttactatttaagaaataattac
ggaagcagatataagtgggagtatacttactatagtagaaacaaggacagggatggctac
gaatcatcttacaggagaaggactctgtccagagctcattattccagacaatcttcaagt
ccagagtttagaattaattcatccttttctgaaagaacaaatgctaggaaaaaaaataat
cacagtgaaaggaaatactactactatgaaaggcatagatcaaggagcctgtctagtact
cgatcaaggactgcatctacagggcctgaccggacaagaaatgaaaagcctggcgggaag
cgaaaatacaaaacgcggcatttggaaggtgctaatgaaatggctcagccatctcgtgaa
tttgcttctaaagtaaaggaaagtcattaccaaaaatcttcatcaaaattggatgcaagc
tacaaaaatgagagtgacagcttttcagacagccgatcatcagacagagagacaaaacac
aagaggagaaggagaaggacccggagcctaagtgtagagatagtttatgaagggaaagct
accgatacagctagacatcataaaaagaaaaagaagaaacataagaagaagcataagaaa
caccatggcgataatgcttcacattccccagttgtgattaccattgacagtgacagtgat
aaggattctgaagtaaaggaggatgtagaatgtgaccctagtggtcctcaagaccctctg
caaagtgaatttttggcttcttccttggaatcatttgaaactaaagatgtagttacaata
gaagatgaatttggtgtcctgagcaaggagtgtgatttcaccacacttagtaacaacttg
aataatgccaacaaaactgtagataatattccaccccaggcagcttcagttgaacaaact
cttgatgtgagagaagagagcacctttgcctctcatttggagaaccagtccagtaatggc
tcgattcagactgagctgtcaaggcagctgccatcgccacggacatcattaatgtcagtg
tctcttggtagagaccatgatatgtcttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (47)   

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