KEGG   Sus scrofa (pig): 100514639
Entry
100514639         CDS       T01009                                 
Symbol
SOX11
Name
(RefSeq) transcription factor SOX-11
  KO
K09268  transcription factor SOX11/12 (SOX group C)
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100514639 (SOX11)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    100514639 (SOX11)
SSDB
Motif
Pfam: HMG_box HMG_box_2 TSP_Ig-like
Other DBs
NCBI-GeneID: 100514639
NCBI-ProteinID: XP_003354985
Ensembl: ENSSSCG00000008649
UniProt: A0A8D0S848 F1S9L1
Position
3:complement(129797438..129800568)
AA seq 447 aa
MVQQAESLEAESNLPREALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSAKPSASQSPEKNAAGGGSGGAGGGAGGAKTSKGSSKKCGKLKAPAAPAAGG
AKAGAGKAAQPGDYGGAGDDYVLGSLRVSGAGGGGAGKTVKCVFLDEDDEDDEDEDELQL
RIKQEADEEDEEPPHPQLLQPPGQQPPQLLRRYNVAKVPASPTLSSSAESPEGASLYDEV
RAGATSGAGGGSRLYYSFKNITKQHPPPLAQPALSPASSRSVSTSSSSSSSGSSSSSSSG
GEDADDLMFDLSLNFSQSAHSASEQQLGGGAAAGNLSLSLVDKDLDSFSEGSLGSHFEFP
DYCTPELSEMIAGDWLEANFSDLVFTY
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggtgcagcaggccgagagcttggaagcggagagcaacctgccccgggaggcgctggac
acggaggagggtgaattcatggcttgcagcccggtggccctggacgagagcgacccggac
tggtgcaagacggcgtcgggccatatcaagaggccgatgaacgcgttcatggtgtggtcc
aagatcgagcgcaggaagatcatggaacagtctccggacatgcataacgctgagatctcc
aagaggctgggcaagcggtggaaaatgctgaaggacagcgagaagatcccgttcatccgg
gaggcggagcggctgcggctcaagcacatggccgactaccccgactacaagtaccggccc
cggaaaaagcccaaaatggacccctcggccaagcccagcgccagccagagccccgagaag
aacgcggcgggcggcggcagcgggggcgcgggcggcggcgcgggcggcgccaagacctcc
aagggctcgagcaagaaatgcggcaagctcaaggcccccgcggcccccgcggccggcggc
gccaaggcgggcgcgggcaaggcggcccagccgggggactacggcggcgcgggcgacgac
tacgtgctcggcagcttgcgcgtgagcggggcgggcggcggcggcgcgggcaagacggtc
aagtgcgtgttcctggatgaggacgacgaggacgacgaggacgaggacgagctgcagctg
cggatcaagcaggaggcggacgaggaggacgaggagccgccgcacccgcagctcctgcag
cctcccgggcagcagccgccgcagctgctgagacgctacaacgtcgccaaagtgcccgcc
agccccacgctgagcagctcggccgagtcccccgagggcgcgagcctctacgacgaggtg
cgggccggcgcgacctcaggcgccgggggcggcagccgcctctactacagcttcaagaac
atcaccaagcagcacccgccgccgctggcgcagcccgcgctctcgcccgcgtcctcgcgc
tctgtctccacctcctcgtcctcctcgtccagcggcagcagcagcagcagcagcagcggc
ggtgaggacgccgacgacctgatgttcgacctgagcttgaatttctcccaaagcgcgcac
agcgccagcgagcagcagctggggggcggcgcggcggcggggaacctgtccttgtctctg
gtggataaggatttggattcgttcagcgagggcagcctgggctcccacttcgaattcccc
gactactgcacgccggagctgagcgagatgatcgcgggggactggctggaggcgaacttc
tccgacttggtgttcacgtattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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