KEGG   Sus scrofa (pig): 100514865
Entry
100514865         CDS       T01009                                 
Symbol
PSMC2
Name
(RefSeq) 26S protease regulatory subunit 7
  KO
K03061  26S proteasome regulatory subunit T1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03050  Proteasome
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05017  Spinocerebellar ataxia
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    100514865 (PSMC2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100514865 (PSMC2)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100514865 (PSMC2)
   05012 Parkinson disease
    100514865 (PSMC2)
   05014 Amyotrophic lateral sclerosis
    100514865 (PSMC2)
   05016 Huntington disease
    100514865 (PSMC2)
   05017 Spinocerebellar ataxia
    100514865 (PSMC2)
   05020 Prion disease
    100514865 (PSMC2)
   05022 Pathways of neurodegeneration - multiple diseases
    100514865 (PSMC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ssc03051]
    100514865 (PSMC2)
Proteasome [BR:ssc03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     100514865 (PSMC2)
SSDB
Motif
Pfam: AAA PRS7_OB AAA_lid_3 AAA_22 AAA_2 AAA_5 AAA_16 DUF815 nSTAND3 RuvB_N AAA_28 AAA_18 AAA_7 AAA_14 Prot_ATP_ID_OB_C AAA_33 TIP49 Sigma54_activ_2 Mg_chelatase RNA_helicase AAA_24 IstB_IS21 AAA_3
Other DBs
NCBI-GeneID: 100514865
NCBI-ProteinID: NP_001231937
Ensembl: ENSSSCG00000015424
UniProt: A0A8D0VT21 A0A4X1VCL1
Position
9:103362684..103376048
AA seq 433 aa
MPDYLGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKIN
ELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAK
FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGC
KEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRV
IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTML
ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHAR
SMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSY
AKFSATPRYMTYN
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgccggactacctcggtgccgatcagcggaaaaccaaagaagatgagaaggacgataag
cccatccgagctctggatgagggggatattgcgttgctgaaaacttatggtcagagcact
tactctaggcaaatcaaacaggttgaagatgacattcaacaacttctcaagaagattaat
gagctcactggaattaaagagtctgacactggcctggccccaccagcactctgggatttg
gctgccgataagcaaacactccagagtgaacagcctttgcaggtggcaagatgtacaaag
ataatcaacgctgattcggaggacccaaagtacattatcaatgtgaagcagtttgccaag
tttgtggtggatctcagtgatcaggtagcacctaccgacattgaagaagggatgagagtt
ggtgtggacagaaataagtatcagattcacattccactgcctcctaagattgaccccaca
gttaccatgatgcaggtggaggaaaagcctgatgttacatacagtgatgtgggtggctgt
aaggaacagattgagaaacttcgagaagtagttgaaaccccactacttcatccagagagg
tttgttaaccttggcattgagcctcccaagggtgtgctgctctttggtccacctggtaca
ggcaagacactctgtgctcgggcagttgctaacaggaccgatgcttgcttcattcgagtt
attgggtctgagcttgtgcagaagtatgttggtgagggggctcgaatggttcgagagctc
tttgaaatggccagaaccaagaaagcctgccttatcttctttgatgaaatcgatgctatt
ggaggggcccgttttgatgatggtgctgggggtgacaatgaagtgcagagaacgatgttg
gaattgatcaaccagctggacgggtttgatcctcgaggcaacattaaagtgctaatggcc
acaaacagacctgacactctggacccagcgctgatgaggccagggagactggacaggaag
attgagtttagcttacctgatctagagggtcggactcacatttttaagatccatgcccgt
tcaatgagtgttgaaagagatatcagatttgaattgttagcacgactctgtccaaatagc
acgggtgctgagatcagaagtgtctgcactgaagctggtatgtttgccatccgagcacgg
cgaaaaattgctacggagaaggatttcttggaagctgtaaataaggttattaagtcctat
gccaagttcagtgctactcctcgctacatgacatacaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (9)   
Genome (1)   
   KEGG GENOME (1)   
Gene (158)   
   KEGG ORTHOLOGY (1)   
   RefGene (153)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
Protein domain (23)   
   Pfam (23)   
All databases (213)   

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