KEGG   Sus scrofa (pig): 100515986
Entry
100515986         CDS       T01009                                 
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X2
  KO
K14407  cleavage stimulation factor subunit 2
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100515986 (CSTF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100515986 (CSTF2)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100515986 (CSTF2)
    U7-dependent histone pre-mRNA processing factors
     100515986 (CSTF2)
SSDB
Motif
Pfam: CSTF2_hinge RRM_1 CSTF_C RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 100515986
NCBI-ProteinID: XP_003135279
Ensembl: ENSSSCG00000012486
Vega: OTTSUSG00000004714
UniProt: A0A4X1W4R2 F1S1L9
Position
X:82508739..82540861
AA seq 572 aa
MAGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQTVHSTGPGSGSNVSMNQQNPQAPQAQSLSGMHVN
GAPPLMQASLQAGVAAPGQIPATVTGPGPGSLAPGGGMQAQVGMPGSGPVSMERGQVPMQ
DPRAAMQRGPLPANVPTPRGLLGDAPNDPRGGTLLSVTGEVEPRSYLGPPHQGPPMHHVP
GHDSRGPPPHEMRGGPLAEPRPLMAEPRGPMLDQRGPPLDGRGGRDPRGIDARGMEARAM
EARGLDARGLEARAMEARAMEARAMEARAMEVRGMEARSMDTRGPVPGPRGPMPSGIQGP
SPINMGAVGPQGSRQVPVMQGAGMQGASIQAGGQPGGFSPGQNQVTPQDHEKAALIMQVL
QLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggcgggtttgactgtgagagaccctgcggtggaccgttcgctacgttcggtgttcgtg
gggaacattccttatgaggctactgaagagcaattaaaggacatcttttctgaggttgga
cctgttgttagtttcaggttggtatatgatagggagacaggaaaaccaaagggttatggc
ttctgtgaataccaagaccaggagacagcacttagtgccatgcgaaacctaaatgggcgt
gaattcagtgggagagcacttcgagtggacaatgctgccagcgaaaagaacaaagaggag
ctgaagagtcttggcactggtgcccctgtcattgagtcaccttatggagagaccatcagt
cccgaggatgcccctgaatccattagcaaagcagttgccagtcttccaccagagcagatg
tttgaactgatgaaacaaatgaagctctgtgtccagaatagtccccaggaagcacggaac
atgttgcttcagaaccctcaactggcttatgctttgctacaagcacaggtagtgatgaga
attgtggatccagaaatcgccttgaaaattctgcatcgccagacaaatatcccaacactg
attgcaggcaaccctcagacagtccacagcactggacctggctcaggatccaatgtgtca
atgaaccagcagaatcctcaggcccctcaggcccagtctttgagtggaatgcatgtcaac
ggagcacctcctctgatgcaggcttctctgcaggctggagttgcagcaccagggcagata
ccagccactgtaacaggacctggccctggttccttagctcctggaggaggaatgcaggcc
caggttggaatgccaggaagtggaccagtatccatggagcggggacaagtgccgatgcaa
gaccccagagcagctatgcagcgtgggcccttgcctgccaatgtcccaactcctcgaggt
ctgttaggagatgctccaaatgacccacgtggaggcactttactttctgtaactggagag
gtagagcctagaagttacctgggaccacctcatcagggtccgcccatgcaccatgtccct
ggccatgacagccgtggcccacccccacatgagatgaggggagggccattagctgagccc
agacctctaatggcagagccaagaggacccatgctagatcagaggggtccacccttggat
ggcagaggcggaagagatcctcgaggcatagatgcacgagggatggaggcacgagccatg
gaggcaagaggattagatgctagaggattggaggcccgtgcgatggaggcccgtgcaatg
gaggcccgtgcaatggaggcccgtgcaatggaagtcagagggatggaggccagaagcatg
gatacaaggggccctgtcccaggcccaagaggccctatgcctagtggaatccagggtcct
agtccaattaacatgggtgcagttggcccccagggatccagacaggtcccagtcatgcag
ggagcaggcatgcaaggagcgagcattcaggctggaggccagcctggcggctttagtcct
ggccagaaccaagtcactccacaggaccacgagaaggctgctttgatcatgcaggttctt
cagctaactgcagaccagattgccatgctgcctcctgagcagaggcagagtatcctgatc
ttaaaggaacaaatacagaaatctactggagcgccttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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