KEGG   Sus scrofa (pig): 100516009
Entry
100516009         CDS       T01009                                 
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
  KO
K17936  sorting nexin-27
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100516009 (SNX27)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ssc04990]
    100516009 (SNX27)
Membrane trafficking [BR:ssc04131]
 Protein recycling
  Others
   Others
    100516009 (SNX27)
Domain-containing proteins not elsewhere classified [BR:ssc04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   100516009 (SNX27)
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 SNX17-27-31_F1_FERM PDZ_2 USP7_C2 SNX17_FERM_C UBX RBD SNX17-31_F2_FERM DarA_N Ras_bdg_2
Other DBs
NCBI-GeneID: 100516009
NCBI-ProteinID: XP_003125809
Ensembl: ENSSSCG00000006619
UniProt: A0A480XS68 A0A8D0MEL7
Position
4:complement(97533643..97620816)
AA seq 541 aa
MADEDGEGIHPAAPHRNGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDL
IRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEKF
VVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLE
EYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQV
YQAIAAKVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTVRKW
LFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLRT
CEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDVA
T
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggcggacgaggacggggaagggattcaccccgcagcccctcacaggaacggaggtggc
ggcggcggtggagggtctgggctccactgcgccgggaacggcggcgggggaggcggcggc
ccgcgggtcgtgcgcattgtcaagtccgagtccggctacggcttcaacgtgcggggccaa
gtgagcgagggcgggcaactgcggagcatcaacggggagctgtacgcgccgctgcagcat
gtgagcgccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggaccgc
attctggaggtgaacggcgtgaatgttgagggagcgacccacaagcaggtggtggacctg
atccgagcaggcgagaaggaattgatcttgacagtgttatctgtacctcctcatgaggca
gataatctagatccaagtgacgactcgctgggacaatcattttatgattacacagaaaag
caagcagtgcccatatcggtccccacatacaaacatgtggaacagaatggtgagaagttt
gtggtatacaatgtttacatggcagggaggcagctgtgttctaagcggtaccgagagttt
gccatcctacaccagaacctgaagagggagtttgccaacttcacatttccccgacttcca
gggaagtggccattctctttatcagaacagcaattagatgcccgacgtcgagggttggaa
gaatatttagaaaaagtgtgctcaatacgagtcattggcgagagtgacatcatgcaggaa
ttcctatcagaatcagatgagaactacaatggtgtgtccgacgtagagctgagagtagcg
ttaccagatggaacaacagttacagtcagggttaaaaagaacagtacaacagatcaagta
tatcaggctattgcagcaaaggttggcatggacagtacgacagtaaattactttgcctta
tttgaagtgatcaatcattcctttgtgcgtaagctggcacctaatgaatttcctcataaa
ctctacgtccagaattacacatcagctgtgccaggcacctgcctgactgttcgaaagtgg
ctttttactacagaagaagaaatcctcttaaatgacaatgatcttgctgttacctacttc
tttcatcaggctgttgatgatgtgaaaaaaggttacatcaaagcagaggaaaagtcctac
caattacagaagttgtatgaacaaaggaaaatggtcatgtacctcaatatgctaaggact
tgtgagggctacaatgaaatcatcttcccccactgtgcatgtgactccaggaggaagggg
catgttatcacagccatcagcatcacgcactttaaactgcatgcctgcactgaagaagga
cagctggagaatcaggtaatagcatttgaatgggatgagatgcaacgatgggatacagat
gaagaaggaatggccttctgttttgaatatgcaagaggagagaagaagcctcgatgggtt
aaaatcttcacaccatatttcaattacatgcatgaatgcttcgagagggtgttctgcgag
ctcaagtggagaaaagagaacattttccagatggcgaggtcacagcagagggatgtggcc
acctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (43)   

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