KEGG   Sus scrofa (pig): 100516212
Entry
100516212         CDS       T01009                                 
Symbol
TRAPPC4
Name
(RefSeq) trafficking protein particle complex subunit 4 isoform X2
  KO
K20303  trafficking protein particle complex subunit 4
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100516212 (TRAPPC4)
Membrane trafficking [BR:ssc04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    100516212 (TRAPPC4)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    100516212 (TRAPPC4)
SSDB
Motif
Pfam: Sybindin Sedlin_N PDZ_6 PDZ
Other DBs
NCBI-GeneID: 100516212
NCBI-ProteinID: XP_003129966
Ensembl: ENSSSCG00000015104
UniProt: A0A8D2A490 A0A4X1SKI9
Position
9:46242196..46246344
AA seq 219 aa
MAIFSVYVVNKAGGLIYQLDSYTPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG
HAVLAINGVDVNGKYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLFA
IGSQLSPEQGSSGIEMLETDTFKLHCFQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSDF
ALKNPFYSLEMPIRCELFDQNLKLALEVAEKAGTFGPGS
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcgattttcagtgtgtatgtggtgaacaaagctggcggcctgatttaccagttggac
agctacacgccacgggccgaggctgagaaaacgtttagctaccctcttgatctgctgctc
aagctgcacgacgagcgtgtactggttgccttcggccagcgcgacggcatccgggtgggc
cacgcagtgctggccatcaatggtgtggacgtgaatggtaaatatacggccgatgggaaa
gaggtgctggagtacctgggcaaccctgctaactacccggtgtccattcgattcggccgg
cctcgcctcacctcaaatgagaagctcatgctggcctccatgttccactcgctgttcgca
atcggctcccagctgtctcctgaacagggcagctcaggcattgagatgctggagacagac
acattcaaactgcactgcttccaaacactgacagggataaagtttgtggtgctggcagat
cctaggcaggctgggatagactctcttctccgaaagatttatgagatttactcagacttt
gccctgaagaatccattttactccctggaaatgcccatcaggtgtgagctgtttgaccag
aacctgaagttagccctggaggtggcagagaaggctggaacttttggacctgggtcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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