KEGG   Sus scrofa (pig): 100516716
Entry
100516716         CDS       T01009                                 
Symbol
GABRE
Name
(RefSeq) gamma-aminobutyric acid receptor subunit epsilon isoform X1
  KO
K05185  gamma-aminobutyric acid receptor subunit epsilon
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04723  Retrograde endocannabinoid signaling
ssc04727  GABAergic synapse
ssc05032  Morphine addiction
ssc05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100516716 (GABRE)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100516716 (GABRE)
   04723 Retrograde endocannabinoid signaling
    100516716 (GABRE)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    100516716 (GABRE)
   05033 Nicotine addiction
    100516716 (GABRE)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100516716 (GABRE)
Ion channels [BR:ssc04040]
 Ligand-gated channels
  GABA-A
   100516716 (GABRE)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb C5-epim_C
Other DBs
NCBI-GeneID: 100516716
NCBI-ProteinID: XP_003135510
Ensembl: ENSSSCG00000012754
UniProt: F1S2D3 A0A8D1J1C9
Position
X:complement(123278459..123296070)
AA seq 497 aa
MLTKVLLILLGTFVILPSSIEGPYVGSWKGPTASAEDVYDPKPQAPETELPTEEIQPTTV
ETYDRLGKLPAATHILDSILNNYDYKLRPGIGERPTVVTVELSVNTLGPISILDMEYTID
ITFYQTWYDERLRYNGSFESFVLNGNLVSLLWVPDTFFRNSKRTQEHSITMPNQMVRIYK
DGKVLYTIRMTIDAGCSLHMVKFPMDSHSCPLSFSSFSYPVSDIIYKWDNFTLEINENNS
WKLFQFDFTGVSNSTETIATLAGDFMVMTLFFNVSRRFGFVAFQNYVPSSVTTMISWISF
WLKKDSAPARTSLGITSVLTMTTLGTFSRKNFPRVSYITALDFYIAICFVFCFCALMEFA
VLNFLTYNRTHPRGSPKLRHPRIHVRAPTPPRIPDPESFVCDIEDSEEEEEEESDEEDEG
PSCPARQAVRPSRASSPGGCCRWCRRYCCMVPGCDGSSWQQGRLFIHVYRLDNYSRVIFP
VTFFFFNVLYWLVCLNL
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgttgaccaaagttctcctgatcctcctgggcacgttcgtaatcctcccgtcgagtatt
gaaggaccatatgttgggtcatggaagggacccaccgccagtgctgaggatgtctatgat
cccaagccccaggctcctgaaacagaactccccactgaagaaatacagcccaccactgtt
gagacctatgataggcttggcaaactgccagcagccactcacatcctggacagcatcttg
aataactatgactacaaactgcgccctggcattggagagaggcccactgtggtcactgtt
gagctctccgtcaacaccctggggcctatctctatcctggacatggaatacaccattgac
atcaccttctaccagacttggtatgacgagcgtcttcgttacaacggcagctttgagagc
tttgttctgaatggcaacctggtgagcctgttatgggtcccagacaccttttttcgaaat
tccaagaggacccaggaacactcgatcaccatgcccaatcagatggtccgcatctacaag
gacggcaaggtgttgtacacaatcaggatgaccattgatgctggatgctcactccacatg
gtcaaatttccaatggattctcactcttgccctctgtctttctctagcttttcctatcct
gtgagtgatatcatctacaagtgggacaatttcacgcttgaaatcaatgagaataattcc
tggaagctcttccagtttgattttacaggagtgagcaactcaactgaaactatcgcaacc
ctagctggtgatttcatggtcatgacgcttttcttcaatgtgagtaggcggttcggcttt
gtggcctttcaaaactatgttccttcttctgtgaccacgatgatctcctggatttccttt
tggctcaagaaagactctgctcccgccaggacttctttagggatcacttctgtactcacc
atgaccacactgggcaccttttcccggaagaatttcccacgtgtctcctatattacagcc
ttggatttctatattgctatctgcttcgtcttctgcttctgcgctctaatggagtttgcc
gtgctcaacttcctgacctacaaccggacgcacccccgtggttctccaaaacttcgccat
cctcgtatccatgtgcgtgcccccacccctccccgcatcccagatcctgaatctttcgtg
tgcgacattgaggactctgaggaggaagaggaggaggagagtgatgaagaggacgaggga
ccatcttgcccagcccgccaggctgtgaggccaagcagagcctctagccctggcggctgc
tgcaggtggtgcaggaggtattgctgcatggtccctggttgtgatggtagcagctggcag
cagggccgcctcttcatccatgtctaccgcctggataactactcgcgagttattttccct
gtcactttcttcttcttcaatgtgctctactggcttgtttgccttaacctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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