KEGG   Sus scrofa (pig): 100516779
Entry
100516779         CDS       T01009                                 
Symbol
PSMA1
Name
(RefSeq) proteasome subunit alpha type-1
  KO
K02725  20S proteasome subunit alpha 6 [EC:3.4.25.1]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03050  Proteasome
ssc05010  Alzheimer disease
ssc05012  Parkinson disease
ssc05014  Amyotrophic lateral sclerosis
ssc05016  Huntington disease
ssc05017  Spinocerebellar ataxia
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    100516779 (PSMA1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100516779 (PSMA1)
   05012 Parkinson disease
    100516779 (PSMA1)
   05014 Amyotrophic lateral sclerosis
    100516779 (PSMA1)
   05016 Huntington disease
    100516779 (PSMA1)
   05017 Spinocerebellar ataxia
    100516779 (PSMA1)
   05020 Prion disease
    100516779 (PSMA1)
   05022 Pathways of neurodegeneration - multiple diseases
    100516779 (PSMA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssc01002]
    100516779 (PSMA1)
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ssc03051]
    100516779 (PSMA1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100516779 (PSMA1)
Enzymes [BR:ssc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     100516779 (PSMA1)
Peptidases and inhibitors [BR:ssc01002]
 Threonine peptidases
  Family T1: proteasome family
   100516779 (PSMA1)
Proteasome [BR:ssc03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   alpha type subunits
    100516779 (PSMA1)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100516779 (PSMA1)
SSDB
Motif
Pfam: Proteasome Proteasome_A_N
Other DBs
NCBI-GeneID: 100516779
NCBI-ProteinID: XP_003123013
Ensembl: ENSSSCG00000013391
UniProt: F2Z5L7 A0A8D0TIG9
Position
2:44740102..44755296
AA seq 263 aa
MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ
KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM
ECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLEERP
QRKAQPAQPADEPAEKADEPMEH
NT seq 792 nt   +upstreamnt  +downstreamnt
atgtttcgcaaccagtatgacaatgatgtcactgtttggagccctcagggcaggattcat
caaattgaatatgcaatggaagccgtcaaacaaggttcagcaacagttggtctgaaatca
aaaacccatgcagtgctggttgcattgaagagggcacaatcagaacttgcagctcatcag
aaaaaaatcctccatgttgataaccatatcggtatctcaattgcgggacttactgccgat
gctagactgttatgtaattttatgcgtcaggagtgtttggattccagatttgtatttgac
agacctctgcctgtgtctcgtcttgtatctctaattggaagcaaaacccagataccaacg
caacgatatggccggagaccgtatggtgttgggctacttattgctggttatgatgatatg
ggccctcacattttccagacttgtccatctgctaactatttcgactgcagagccatgtcc
attggagctcgttctcaatcagctcgtacttacttggagagacatatgtcggagtttatg
gaatgcaatttgaatgaactggttaagcatggtttgcgagccttacgagagaccctgcct
gcagaacaggacctaactacaaagaatgtttccattggaattgtcggtaaagacttagag
tttacgatttatgacgatgatgatgtgtctccattcctggaaggtcttgaagaaagacca
cagagaaaggcacagcctgctcaacctgctgatgaacctgcagaaaaggctgatgaacca
atggaacattaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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