KEGG   Sus scrofa (pig): 100516885
Entry
100516885         CDS       T01009                                 
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04723  Retrograde endocannabinoid signaling
ssc04727  GABAergic synapse
ssc04742  Taste transduction
ssc05032  Morphine addiction
ssc05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100516885 (GABRA6)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100516885 (GABRA6)
   04723 Retrograde endocannabinoid signaling
    100516885 (GABRA6)
  09157 Sensory system
   04742 Taste transduction
    100516885 (GABRA6)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    100516885 (GABRA6)
   05033 Nicotine addiction
    100516885 (GABRA6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100516885 (GABRA6)
Ion channels [BR:ssc04040]
 Ligand-gated channels
  GABA-A
   100516885 (GABRA6)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb CytochromB561_N DUF4396
Other DBs
NCBI-GeneID: 100516885
NCBI-ProteinID: XP_003134138
UniProt: A0A4X1TXJ7 A0A8D1XUC0
Position
16:complement(61855698..61872503)
AA seq 453 aa
MASPLSWLYMILWVENALGKLEDEGNFYSENVSRILDNLLEGYDNRLRPGFGGAVTEVQT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFGGPAEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYAIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQTQKAKKKAQIAASSPVTITKATEPLEAEI
VLHPDSKYHLKKRITSLTLPIVPSFEASKVLARAPILQSTPATPPPLSPVFGDTSKIDQY
SRILFPVAFAGFNLVYWIVYLSKDTMEVSSSVD
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggcgtcgcctctgtcctggttgtacatgattctgtgggtagaaaatgccctaggaaaa
cttgaagatgaaggaaatttctactcagaaaatgtcagtcggatcctggacaacttgcta
gaaggttatgacaatcggctacggccaggatttggaggtgctgtcactgaagtccaaaca
gacatctacgtgacgagttttgggcctgtgtcagatgtggagatggagtatacgatggac
gttttcttccgccaaacttggactgatgagaggttgaagtttggggggccagctgagatt
ctgagtttgaataacttgatggtcagtaaaatctggacacctgacactttttttaggaat
ggcaagaaatcaattgctcacaatatgacaactcctaataaactcttcagaataatgcag
aatggaaccattctctacaccatgaggctcactatcaatgctgactgtcctatgaggctg
gttaatttccctatggatgggcatgcttgtccactcaagtttgggagttatgcttacccc
aaaagtgaaatcatatatacatggaaaaaaggaccactttactcagtggaagtcccagaa
gaatcttcaagcctacttcagtatgatctgattggacaaacagtatctagtgaaacaatc
aaatctaacacaggtgaatatgcaataatgacggtttatttccacttgcaaaggaagatg
ggctacttcatgatacagatatatactccttgcatcatgacagtcattctttcccaggtg
tctttctggattaataaggaatctgtgccggccagaactgtctttgggatcaccactgtt
ttaaccatgaccactttaagcatcagtgcccggcactccttgccaaaagtgtcttatgcg
accgccatggattggtttatagctgtttgctttgctttcgtcttttctgctcttattgag
tttgcggctgtcaactacttcaccaatcttcagactcagaaggccaaaaagaaggcacag
attgcagcctcatcccctgtgactatcacaaaagcgactgaacccttggaagctgagatt
gttttgcatcctgattccaagtatcatctgaagaaaagaatcacctctctgaccttgcca
attgttccatcttttgaggccagcaaagtcctcgcgagagctcccatcttacagtcaaca
cctgctacacccccacccctctctccagtctttggagataccagtaaaatagaccaatat
tctcggattctcttcccagttgcatttgcaggattcaaccttgtatattggatagtttat
ctttccaaagacacaatggaagtgagtagcagtgttgactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system