KEGG   Sus scrofa (pig): 100517063
Entry
100517063         CDS       T01009                                 
Symbol
GABRB2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
  KO
K05181  gamma-aminobutyric acid receptor subunit beta
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04080  Neuroactive ligand-receptor interaction
ssc04723  Retrograde endocannabinoid signaling
ssc04726  Serotonergic synapse
ssc04727  GABAergic synapse
ssc05032  Morphine addiction
ssc05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100517063 (GABRB2)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    100517063 (GABRB2)
   04726 Serotonergic synapse
    100517063 (GABRB2)
   04723 Retrograde endocannabinoid signaling
    100517063 (GABRB2)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    100517063 (GABRB2)
   05033 Nicotine addiction
    100517063 (GABRB2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    100517063 (GABRB2)
Ion channels [BR:ssc04040]
 Ligand-gated channels
  GABA-A
   100517063 (GABRB2)
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD
Other DBs
NCBI-GeneID: 100517063
NCBI-ProteinID: XP_003483903
UniProt: A0A8D1UTI8 A0A4X1U2I4
Position
16:61984923..62240902
AA seq 512 aa
MWRVRKKGYFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPV
AVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYNVIPLNLTLDNRVADQLWVPDT
YFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIES
YGYTTDDIEFYWRGDDNAVTGVTKIELPQFSIVDYKLITKKVVFSTGSYPRLSLSFKLKR
NIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIP
YVKAIDMYLMGCFVFVFMALLEYALVNYIFFGRGPQRQKKAAEKAASANNEKMRLDVNKI
FYKDIKQNGTQYRSLWDPTGNLSPTRRTTNYDFSLYTMDPHENILLSTLEIKNEMATSEA
VMGLGDPRSTMLAYDASSIQYRKAGLPRHSFGRNALERHVAQKKSRLRRRASQLKITIPD
LTDVNAIDRWSRIFFPVVFSFFNIVYWLYYVN
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgtggagagtccggaaaaagggctactttgggatttggtcgtttcccttaataatcgct
gctgtctgtgcgcagagtgtcaatgaccctagtaatatgtcgctggttaaagagacggtg
gatagactcctgaaaggctatgatattcggctgagaccagattttggaggtccccccgtg
gctgtgggaatgaacattgacattgccagcatcgatatggtttctgaagtcaatatggat
tatacattgacaatgtactttcagcaagcgtggagagataagaggctgtcctataatgta
atacctttaaacttgactctggacaatagggtggcagaccagctctgggtgcccgacacc
tacttcctgaatgataagaagtcttttgtgcacggagtgaccgtcaagaaccgcatgatc
cgcctgcatccagatgggacggtcctgtacggcctcagaatcacaaccacagctgcctgc
atgatggacctaaggcggtacccactggatgaacaaaattgcaccctggaaattgaaagc
tatggatatacaactgatgacattgagttttactggcgtggggatgataatgcagtcaca
ggagtaacgaagattgaacttccacagttctctatcgtagactacaaacttatcaccaag
aaggtggttttctccacaggttcctatcccaggttgtccctcagctttaagcttaagaga
aacattggttacttcattctgcaaacatacatgccatctatcttgatcactatcctctcc
tgggtctccttctggattaattacgatgcttcagctgcaagagtggcattaggaattaca
actgtgctaaccatgaccacgatcaatacccaccttcgggagactctccctaaaatcccc
tatgtgaaggccattgacatgtacctgatggggtgctttgtctttgttttcatggccctt
ctggaatatgctttggtcaactatatcttctttgggaggggacctcaacgccaaaagaaa
gcagctgaaaaagctgctagtgccaacaatgagaagatgcgcctagatgtcaacaagatt
ttttataaagatattaaacaaaatgggacccaatatcgatccttgtgggacccaactgga
aacctctccccaactagacggactaccaattacgatttctctctgtatacgatggacccc
catgagaatattttactgagcactcttgagataaaaaatgaaatggccacgtctgaggct
gtgatgggacttggagaccccaggagcacaatgctggcctatgatgcctccagcatccag
tatcggaaagccgggttgcccaggcatagttttggccgaaatgctctggaacggcacgtg
gcacagaagaaaagccgcctgcggagacgtgcctcccagctgaaaatcaccatccccgac
ttgactgatgtgaatgccatagatcggtggtcccgcatattcttcccagtggttttttcc
ttcttcaacatcgtctattggctttattatgtgaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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