KEGG   Sus scrofa (pig): 100517749
Entry
100517749         CDS       T01009                                 
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03030  DNA replication
ssc03410  Base excision repair
ssc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100517749 (FEN1)
   03410 Base excision repair
    100517749 (FEN1)
   03450 Non-homologous end-joining
    100517749 (FEN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssc03032]
    100517749 (FEN1)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100517749 (FEN1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100517749 (FEN1)
DNA replication proteins [BR:ssc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    100517749 (FEN1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     100517749 (FEN1)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     100517749 (FEN1)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100517749 (FEN1)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc XPG_I_2 HHH_5
Other DBs
NCBI-GeneID: 100517749
NCBI-ProteinID: XP_003122675
Ensembl: ENSSSCG00000028696
UniProt: F1RKS3 A0A4X1VNN0
Position
2:complement(9752004..9756863)
AA seq 380 aa
MGIQGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAG
EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRG
IGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKEAQQLFLEPEVLDPEAVELKWSE
PNEEELVKFMCGEKQFSEERIRSGVRRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKEPEP
KGSAKKKAKTGAAGKLKRAK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggggattcaaggactggccaaactgatcgccgacgtggcccctggggccatccgggag
aatgacatcaagagctactttggccgcaaggtggccatcgatgcctccatgagcatctat
cagttcctgatcgccgttcgccagggcggggatgtgctgcagaacgaggagggcgagacc
accagccacctgatgggcatgttctaccgcaccatccgcatgatggagaacggcatcaag
cccgtgtacgtcttcgacggcaagccgccgcagctcaagtcgggggagctggccaaacgc
agcgagcggcgggccgaggcggagaagcagctgcagcaggcgcaggctgccggcgccggg
gaggaggtggagaagtttaccaagcgcctggtcaaggtcaccaagcagcacaacgatgag
tgcaagcatctcctgagcctcatgggcgtcccgtacctcgacgcgcccagcgaggcggag
gccagctgcgcagccctggtgaaggctggcaaagtctacgccgcggccacagaggacatg
gattgcctgaccttcggcagccccgtgctcatgcggcacctgactgccagtgaggccaag
aagctgcccatccaggagttccacctgagccgggtcctgcaggagctgggcctgaaccag
gagcagtttgtggatctctgcatcctgctgggcagcgactactgtgagagcattcggggc
attgggcccaagcgggccgtggacctcatccagaagcacaagagcatcgaggagatcgtg
cgtcggctcgaccccaacaagtaccctgtgccggaaaactggctccacaaggaggcccag
cagctcttcctggagccggaggtgctggacccggaggctgtggagctgaagtggagcgag
ccaaatgaagaagagctcgtcaagttcatgtgcggcgagaagcagttctccgaggagcga
atccgcagcggggtcaggcggctgagcaagagccgccagggcagcacccagggccgcctg
gatgatttcttcaaggtgaccggctccctctcgtccgctaagcgcaaggagccagagccc
aagggatccgctaagaagaaggcaaagaccggggcagcagggaagctcaaaagggcaaaa
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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