KEGG   Sus scrofa (pig): 100518332
Entry
100518332         CDS       T01009                                 
Symbol
TAF15
Name
(RefSeq) TATA-binding protein-associated factor 2N
  KO
K14651  transcription initiation factor TFIID subunit 15
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03022  Basal transcription factors
ssc05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100518332 (TAF15)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    100518332 (TAF15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssc03021]
    100518332 (TAF15)
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100518332 (TAF15)
Transcription machinery [BR:ssc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100518332 (TAF15)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100518332 (TAF15)
SSDB
Motif
Pfam: RRM_1 zf-RanBP
Other DBs
NCBI-GeneID: 100518332
NCBI-ProteinID: NP_001302693
Ensembl: ENSSSCG00000017707
UniProt: A0A8D2BCE6 A0A8X9AEW3
Position
12:complement(39687171..39716761)
AA seq 602 aa
MSDSGSYGQSGGEQQSYSSYGNQGNQGYGQAPQGYSGYGQTTDSSYGQNYGGYSSYGQSQ
SGYSQPYGGYENQKQSSYGQPSYNNQGQQNTESSGGQSGRVPSYDQSDYGQQDSYNQQSG
YDHHQGSYDEQSNYNQQHDSYNQNQQSYHSQRENYSHHTQDDRRDVSRYGEDNRGYGGSQ
GGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGPRPDADSESDNSDNNTIFVQGL
GEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAID
WFDGKEFHGNIIKVSFATRRPEFMRGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCP
NPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGD
RSGGGYGGDRSGGGGYGGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGG
DRSGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGYGGDRSGGG
YGGDRGSGSGYGGDRSGGYGGDRSGGGYGGDRSGGYGGDRGGYGGKMGGRNDYRNDQRNR
PY
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgtctgattctggaagttacggtcaatctgggggtgagcagcaaagttattcttcctat
ggaaatcaaggcaaccaaggttatggacaagcaccacaaggctattctggctatgggcag
actactgattcttcgtatgggcagaactatggcggctactccagttacggacaaagccaa
tcaggttattcgcagccctacggtggttatgagaatcaaaagcagagctcatatggccag
ccatcctataataaccagggacagcaaaacacggaatcatcaggaggccaaagtggaaga
gtgccttcatatgaccagtcagactatggtcaacaagattcatataaccagcagtcaggc
tatgatcaccatcaaggctcatatgacgagcaatcaaattacaatcagcagcatgattcc
tataatcaaaaccagcagtcctaccattcacaaagggaaaattacagccaccacacacaa
gatgaccgtcgtgatgtgagtaggtatggagaagataatagaggatatggcgggtcacag
ggaggaggtagagggcgtgggggatatgacaaggatggaagaggtcctatgacaggatca
agtggtggtgaccgcggtggcttcaaaaattttggtggtcacagggattatggacccagg
ccagatgctgattcagaatctgataattcagataacaacacaatctttgtgcaaggactt
ggggagggtgtgtctacagatcaagtgggggaattctttaaacaaataggaattatcaag
acaaataagaagactggaaagccaatgataaatctatacacagacaaggacacggggaag
ccaaaaggggaggcaacagtatcatttgatgaccctccttcagctaaggcagccattgac
tggtttgatgggaaagaatttcatggcaacatcattaaagtgtccttcgccaccagaaga
cctgagttcatgagaggaggtggaagtgggggtggacggcgaggccgtggaggatataga
ggccggggaggctttcaggggagaggtggagaccccaaaagtggagactgggtttgccct
aatccgtcatgtggaaatatgaactttgctcgaaggaattcctgcaatcagtgcaatgag
cccagaccggaggactctcgtccctcaggaggagatttccggggaagaggctacggtgga
gagaggggctacagaggtcgtgggggcagaggtggagaccgaggtggctacggaggagac
agaagtgggggtggctatggaggagacagaagtggcggcggtggctacggaggagacaga
agtgggggtggctatggaggagacagaagtgggggtggctatggtggggaccgaggagga
ggttatggtggggaccgaggaggtggctatggaggggaccgaggtggcggctatggagga
gaccgaagtggcggctatggaggggaccgaggtggcggctatggaggggaccgaggtggc
ggctatggaggagaccgaggtggcggctatggaggggaccgaggtggcggctatggagga
gaccgaggcggctatggaggagaccgaggcggctatggaggagaccgaagtggggggggc
tacggaggagaccgtggtagtggcagtggctatggtggggaccgaagtggaggctacgga
ggagacaggagtggcggcggctatggtggagaccgaagtgggggctatggaggagaccga
ggtggctatggaggcaagatgggaggaagaaacgactacagaaatgatcagcgcaaccga
ccatactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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