KEGG   Sus scrofa (pig): 100519020
Entry
100519020         CDS       T01009                                 
Symbol
UBQLN4
Name
(RefSeq) ubiquilin-4
  KO
K04523  ubiquilin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04141  Protein processing in endoplasmic reticulum
ssc05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100519020 (UBQLN4)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100519020 (UBQLN4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100519020 (UBQLN4)
   03051 Proteasome [BR:ssc03051]
    100519020 (UBQLN4)
Membrane trafficking [BR:ssc04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    100519020 (UBQLN4)
Proteasome [BR:ssc03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    100519020 (UBQLN4)
SSDB
Motif
Pfam: ubiquitin STI1-HOP_DP UBA Rad60-SLD Ubiquitin_5 YukD Rad60-SLD_2 HOIP-UBA Dsc3_N CUE Arm_2
Other DBs
NCBI-GeneID: 100519020
NCBI-ProteinID: XP_003125749
Ensembl: ENSSSCG00000006500
UniProt: A0A4X1VYL3 A0A480Y2F0
Position
4:93976386..93994830
AA seq 601 aa
MAEPSGAETRPPIRVTVKTPKDKEEIVICDRASVKEFKEEISRRFKAQQDQLVLIFAGKI
LKDGDTLNQHGIKDGLTVHLVIKTPQKAQDQTTATASSPSTPDPASAPSTTPASPATPAQ
PSTSGSAASDTGSGSRRSSGGGPSPGTGEGPPSATASILSGFGGILGLGSLGLGSANFME
LQQQMQRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHMIMANPQMQQLMERNPEISHMLN
NPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQ
FGNNPFSSLAGNSDSSSSQPLRTENREPLPNPWSPSPPTSQAPGSGGEGTGGSGTSQVHP
TVSNPFGINAASLGSGMFNSPEMQALLQQISENPQLMQNVISAPYMRSMMQTLAQNPDFA
AQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTNPRAMQALLQIQQGLQTLQ
TEAPGLVPSLGSFGMSRTPAPSAGSSAGSAPEAPTSSPAAPATSSPTGASSAQQQLMQQM
IQLLAGSGNSQVQTPEVRFQQQLEQLNSMGFINREANLQALIATGGDINAAIERLLGSQL
S
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggcggagccgagcggggccgagacgaggcccccgattcgggtcaccgtcaagacccct
aaggacaaggaggaaattgtgatctgcgatcgagcctcggtcaaggagttcaaagaggaa
atctcccggagatttaaggctcagcaggatcagctggtcctgatcttcgcgggcaagatc
ctcaaggatggggacacattgaaccagcatgggatcaaggatgggctcactgtccatctg
gtcatcaagacccctcagaaggctcaagatcagaccactgccactgcttcttccccttcc
actccagacccagcctcagcaccctccaccacgcctgcttcacccgccacccctgcccag
ccctccacctctggcagtgccgcttcggatactggcagtggaagccgaaggagcagtgga
ggaggtccctccccagggactggggagggacctcccagtgccactgcatccatactctct
ggctttgggggcatcctgggcctgggcagcctgggcctgggctccgccaacttcatggaa
ctgcagcagcagatgcagaggcagctgatgtccaatcctgagatgctgtcgcagatcatg
gagaaccccctggtccaggacatgatgtctaaccctgacctgatgcgccacatgatcatg
gccaaccctcagatgcagcagctgatggagcgaaaccctgagatcagccacatgctcaac
aaccctgagctcatgaggcagacgatggagcttgctcggaatccagccatgatgcaggag
atgatgcggaaccaggaccgggccctgagcaacctggagagcatccccggagggtataat
gccctccgccgcatgtacacggacatccaggagcccatgtttagtgccgcccgggaacag
tttggcaacaatcccttctcttccctggccgggaactccgacagctcatcctcccagcct
ctgcggactgagaatcgagagcccctccctaacccctggagcccctcgccccccacctcc
caggcccccgggtccggtggggagggcaccggaggatcggggaccagccaggtgcacccg
acagtctcgaacccctttgggatcaatgcggctagcctggggtcagggatgttcaacagc
ccagaaatgcaggccctcctccagcagatctctgagaacccccagctgatgcagaacgtg
atatcggccccctacatgcgcagcatgatgcagacacttgcccagaaccctgactttgct
gctcagatgatggtgaacgtgccgcttttcgcggggaacccccagctgcaggagcagctc
cgcctgcagctcccggtcttcctgcagcagatgcagaacccagagtcgctctccattctc
accaatccccgcgccatgcaggcgctgctgcagatccagcagggactgcagaccttgcag
accgaggcccccgggctggtacccagccttggctcctttgggatgtcccggaccccagca
ccctcggcaggcagcagtgccgggtctgcacccgaggctcccacctcctcgccagccgcg
ccagccacatcgtctccaacaggggcctccagtgctcagcagcagcttatgcagcagatg
atccagcttttggctggaagtggaaactcacaggtgcagacgccagaagtgagatttcag
cagcagctggagcagctcaactccatgggcttcatcaatcgtgaagccaacctgcaggcc
ctgatcgccacaggaggggacatcaacgcagctatcgagagactcctgggctctcagctc
tcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

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