KEGG   Sus scrofa (pig): 100520097
Entry
100520097         CDS       T01009                                 
Symbol
TUBD1
Name
(RefSeq) tubulin delta chain isoform X1
  KO
K10390  tubulin delta
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    100520097 (TUBD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100520097 (TUBD1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    100520097 (TUBD1)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100520097 (TUBD1)
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100520097 (TUBD1)
SSDB
Motif
Pfam: Tubulin Tubulin_2
Other DBs
NCBI-GeneID: 100520097
NCBI-ProteinID: XP_003131718
Ensembl: ENSSSCG00000017669
UniProt: A0A8D1UBM5 A0A287B840
Position
12:complement(36079939..36111306)
AA seq 453 aa
MSIVTVQLGQCGNQIGFEVFDALFSDSHCPQGLCSKRENEAYQASCKERFFSEEENGVPI
ARAVLVDMEPKVINQTLSKAAHSGRWKYGQHSCFCQKQGSGNNWAYGYSVHGPRHKESIM
DLIQKEVEKCDSLSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIWPYGTGEV
IVQNYNSILTLSRLYRSSDALLVHENDAVHKICAKLMNIKQISFRDINQVLAHQLGSVFQ
PTYSGEGSWHYRRNPLGDLMENLVPHPEFKMLGVRNIPQMSENSLAYSTFTWAGLLKHLR
QMLISNAKMEEGIDWQIRPPLSGLPALSKMSTNKEFHFNTSIANLVILRGKDVHNADLGA
FKDPALYTSWLEPVHAFNVWKTQRAFSKYEKSAALVSNSQFLVKPLDVIVGKAWNMFASK
AYIHQYTKYGIEEEDFLESFTLLEQVIASYCNL
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtcaatagtaacagtgcaacttggtcaatgtggtaatcagattggttttgaagtgttt
gatgctttatttagtgattcacactgtccccaaggactctgctctaaaagagagaatgag
gcatatcaagcatcttgcaaagaaagattcttcagtgaggaggaaaatggagttccaatt
gctcgtgctgtgcttgttgacatggaacctaaagttatcaatcaaacactgtcaaaggcc
gcccattctggccgatggaaatatggtcagcattcttgcttctgtcaaaaacaaggttct
ggaaacaactgggcatatggttactctgttcatggacccaggcacaaagaatccataatg
gacctaatccagaaggaagtagagaaatgtgattctttgagcggttttttcatcataatg
agtatggctggaggcacaggatcagggctgggagctttcgttacacagaacttagaagat
cagtactcaaactctttgaaaatgaatcagattatatggccttatggaactggtgaggtt
attgttcagaactacaactccattttgacactttctcgcttgtaccgctcttcagacgcc
ctccttgttcatgagaatgatgccgttcataagatctgtgcaaaactgatgaatatcaag
cagatctccttccgtgatataaaccaagtcctcgcacatcagctgggaagtgtgttccaa
cccacttactctggggaaggctcatggcactacagaagaaatccactaggagacttaatg
gagaatttagttccccatccagaattcaagatgctgggtgttcgtaacattcctcaaatg
tctgagaattcattggcatacagcacgtttacttgggctggcctcctgaagcatttgaga
cagatgctcatttctaatgcgaaaatggaagaaggtatcgactggcagatccggcctcct
ttatcaggacttcctgctcttagtaaaatgtctaccaacaaggagtttcattttaacact
tccattgctaacctggtcatccttcgagggaaagatgtgcacaatgcagatctgggagca
tttaaagatccagctctctacacttcctggctagagcctgttcacgctttcaatgtgtgg
aaaacccagcgagcctttagcaaatatgagaagtcggcagcattggtcagcaatagccag
ttcttagtaaaaccacttgatgtgattgtgggcaaagcatggaatatgtttgcttcaaaa
gcctacattcatcaatacacaaaatacggaattgaagaagaggattttttggagagtttt
acattgttagaacaggtgattgccagttattgcaacctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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