KEGG   Sus scrofa (pig): 100520413
Entry
100520413         CDS       T01009                                 
Symbol
PHF8
Name
(RefSeq) histone lysine demethylase PHF8 isoform X2
  KO
K19415  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65 1.14.11.-]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100520413 (PHF8)
Enzymes [BR:ssc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     100520413 (PHF8)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100520413 (PHF8)
SSDB
Motif
Pfam: JHD JmjC Cupin_8 PHD PHD_5 ASH2L-like_WH PHD_4 JmjC_2
Other DBs
NCBI-GeneID: 100520413
NCBI-ProteinID: XP_005673712
Ensembl: ENSSSCG00000012329
Vega: OTTSUSG00000004580
UniProt: F1RUG9 A0A8D1GZT7
Position
X:complement(46648164..46761192)
AA seq 1024 aa
MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS
IMKKRRVSSKGHDTHKGKPVKTGSPTFIRELRSRTFDSSDEVILKPTGSQLTVEFLEENS
FSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLGDFVKYYY
SGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECIFERPNVQKYCLMSVR
DSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC
YKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFK
FPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEI
PETVRTVQLIKDLAREIRLVEDIFQQNVGKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMS
GLSLPSKSGSKKKGLKPKELFKKAERKGKESSALGPAGQLSYNLMDTYSHQALKTGSSQK
AKFNITGTCLNDSDDDSPDVDLDGSESPLALLMSNGSTKRVKSLSKSRRAKISKKADKAR
LVAEQMMEDEFDLDSDDELQIDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEV
EFDIEEDYTTDEDVVEGVEGKLGNGSGAGGILDLLKASRQVGGPDYAALTEAPASPSTQE
AIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSSSPASQRTPGKRPI
KRPAYWRTESEEEEENASLDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPKKKKNSDD
APWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKKPLL
KEVEQPRPQEPNLSVAAPAPTLATTPQLLTSSSPLPPPEPKQEALSGSLADHEYTARPNA
FGMAQANRSTTPMAPGVFLTQRRPSVGSQSNQAGQGKRPKKGLATAKQRLGRILKIHRNG
KLLL
NT seq 3075 nt   +upstreamnt  +downstreamnt
atggcctcggtaccggtgtattgcctctgtcggctgccttatgatgtgacccgcttcatg
attgagtgtgacatgtgccaggactggtttcatggcagttgtgttggtgtcgaagaggag
aaggctgctgacattgacctctaccactgccccaactgtgaggtcttacatgggccctcc
atcatgaaaaaacgacgcgtatcttcaaaaggccatgatacacacaaggggaagccagta
aagaccggaagtcctacattcattcgagagcttcggagtaggacctttgacagctcagat
gaagtgattctgaagcccactggaagtcagctgaccgtggaattcctggaagagaatagc
ttcagtgtgcccatcctggtcttgaagaaggatggattggggatgacactgccctcacca
tcattcactgtgagggatgtggaacactatgttggttctgacaaagagattgatgtgatc
gatgtgactcgccaggctgactgcaagatgaagcttggtgattttgtgaaatattattat
agtggaaagagggagaaagtcctcaatgtcattagtttggagttctctgataccaggctt
tctaaccttgtggaaacacccaagattgttcgaaagctctcatgggtggagaacttgtgg
ccggaggagtgtatctttgagaggcccaatgtgcagaagtactgcctcatgagtgtgcgg
gatagttatacagactttcacattgactttggtggcacctcagtctggtaccatgtgctc
aagggtgagaagatcttctatctcatccgccctacaaatgccaacttgactctctttgag
tgctggagcagctcctctaaccagaatgagatgttctttggggaccaggtggacaaatgc
tacaagtgttctgtgaagcaaggacagacacttttcattcctacaggatggatccatgct
gtgctgacccctgtggactgccttgcctttggagggaacttcttacacagccttaacatt
gaaatgcagctcaaagcctatgagattgagaagcggttgagcacagcagacctcttcaag
ttccctaactttgagaccatctgttggtatgtgggaaagcacatcctggatatctttcga
ggtttgcgagaaaacaggagacaccctgcctcctacctggtccatggtggcaaagccctg
aacttggcctttagagcctggacaaggaaagaagctctgccagaccacgaggatgagatc
ccagagacagtgaggactgtacagctcattaaagatctggctagggagatccgcctggtg
gaagatatcttccaacagaacgttgggaagacgagcaatatctttgggctgcagaggatc
ttcccagctggctccattcccttaaccaggccagcccattccacttcagtatccatgtcc
gggctgtcactgccctccaaaagtggttcaaagaagaaaggcctgaagcccaaggaactc
ttcaagaaggcagagcgaaagggcaaggagagctcagccttggggcctgctggccaattg
agctataatctcatggacacatacagtcatcaggcactgaagacaggctcttcccagaaa
gcaaagttcaacatcaccggtacctgcttgaatgactcagatgatgactcgccagacgtg
gaccttgatgggagtgagagcccactggccctattgatgtctaatggcagtaccaagagg
gtaaagagcttatccaagtctcggcgagccaagatctcgaagaaggcagacaaggctagg
ctggtggcagaacagatgatggaggatgaatttgacttggattcagatgatgaactacag
attgatgagagactgggaaaggagaaggcgaccctgataataagaccaaaatttcctcga
aagttgccccgtgcgaagccttgctctgaccccaaccgagttcgtgaaccaggggaagtt
gagtttgacattgaggaggactatacaacagatgaggatgtggtagaaggggttgaaggc
aagcttgggaatgggagtggagccggtggaattcttgatctgctcaaggccagcaggcag
gtggggggacctgactatgctgccctcaccgaggctcctgcctctcccagcactcaggag
gccatccagggcatgctgtgcatggccaacctgcagtcctcatcgtcctcaccagctacc
tccagcctgcaggcctggtggaccggggggcaggaccgaagcagtgggagctccagcagt
gggctgggcacagtgtctagcagtcctgcttcccagcgcaccccagggaagcggcccatc
aagcggccagcatactggagaaccgagagcgaggaggaggaggagaacgccagtctcgat
gagcaggacagcttgggagcatgcttcaaggatgcagagtatatttacccttctctggag
tcagacgacgatgatcctgctttgaaatctcgacccaagaaaaagaagaattcagatgat
gctccatggagtcctaaagcccgtgtgaccccaactctgccgaagcaggaccgtcctgtg
cgtgaggggacccgggtagcttccattgagacagggttggctgcagcagctgcaaagttg
gctcagcaggagctacagaaagcccaaaagaagaaatatatcaagaagaagcctttgttg
aaggaggtagaacagcctcgccctcaagagcccaatctcagtgtggcagcgccagcccca
actctggccactacaccacagcttctcacctcctcctctcccctgcctcctcctgagcct
aaacaagaggccctctcaggaagtcttgctgaccatgagtatactgctcgtcccaatgcc
tttggcatggcccaggcaaaccgcagcaccacacccatggcccctggtgtcttcttgacc
cagcgacgcccttcagttggctctcagagcaatcaagcaggacaaggaaagcgccccaaa
aagggcctggctacagcaaagcagagactcggccgtatcctgaaaatccacagaaatgga
aaactgcttctgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (8)   
   Pfam (8)   
All databases (40)   

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