KEGG   Sus scrofa (pig): 100520896
Entry
100520896         CDS       T01009                                 
Symbol
ETF1
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
  KO
K03265  peptide chain release factor subunit 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100520896 (ETF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100520896 (ETF1)
   03012 Translation factors [BR:ssc03012]
    100520896 (ETF1)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     100520896 (ETF1)
Translation factors [BR:ssc03012]
 Eukaryotic type
  Release factors
   100520896 (ETF1)
SSDB
Motif
Pfam: eRF1_2 eRF1_3 eRF1_1 acVLRF1 baeRF_family10 Ribosomal_L7Ae
Other DBs
NCBI-GeneID: 100520896
NCBI-ProteinID: XP_003124023
Ensembl: ENSSSCG00000014337
UniProt: A0A8D0HZG3 F2Z505
Position
2:complement(140471931..140504381)
AA seq 437 aa
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSD
MFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGGDDEFFDLDDY
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggcggacgaccccagtgctgccgacaggaacgtggagatctggaagatcaaaaagctc
attaagagcttggaggcggcccgcggcaatggcacaagcatgatatcactgatcattcct
cccaaagaccagatttcacgagtggcaaaaatgttagcagatgagtttggaactgcatct
aacattaagtcacgagtaaaccgcctttcagtcctgggagccattacatctgtacaacaa
agactcaaactttataacaaagtacctccaaatggcctggttgtttactgtggtacaatt
gtaacagaagaaggaaaggaaaagaaagtcaacattgactttgaacctttcaaaccaatt
aatacatcattgtatttgtgtgacaacaaattccatacagaggctcttacagcactactt
tcagatgatagcaagtttggcttcattgtaatagatggtagtggtgcactttttggcaca
ctccaaggaaatacaagagaagtcctgcacaaattcactgtggatctcccaaagaaacat
ggtagaggaggtcagtcagccttgcgctttgcccgcttaagaatggaaaagcgacataac
tatgttcggaaagtagctgagactgctgtgcagctgtttatttctggggacaaagtgaat
gtggctggtctcgttttagctggatcagctgactttaaaactgaactaagtcaatctgat
atgtttgatcagaggttgcaatcaaaagttttaaaattagttgatatatcctatggtggt
gaaaacggattcaaccaagctattgagttatctactgaagtcctctccaacgtgaagttc
attcaagagaagaaattaatagggcgatacttcgatgaaatcagccaagacacgggcaag
tactgttttggagttgaagatacactaaaggctttagaaatgggagctgtagagattcta
atagtctatgaaaacctggatataatgagatatgttcttcattgccaaggcacagaagag
gagaaaattctctatctaactccagaacaagagaaggataaatctcattttacagacaaa
gagacaggacaagaacatgagctgattgagagcatgcccctgctggaatggtttgctaac
aattataaaaaatttggagctacgttggaaattgtcacagataagtcacaagaaggatcc
caatttgtgaaaggatttggtggaattggaggtatcttgcggtaccgagtagatttccag
ggaatggaataccaaggaggagatgatgaattttttgaccttgatgactactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (57)   

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