KEGG   Sus scrofa (pig): 100521236
Entry
100521236         CDS       T01009                                 
Symbol
HOXA11
Name
(RefSeq) homeobox protein Hox-A11
  KO
K21951  homeobox protein Hox-A11
Organism
ssc  Sus scrofa (pig)
Pathway
ssc05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    100521236 (HOXA11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    100521236 (HOXA11)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    100521236 (HOXA11)
SSDB
Motif
Pfam: DUF3528 Homeodomain Homeobox_KN DTHCT
Other DBs
NCBI-GeneID: 100521236
NCBI-ProteinID: XP_003134898
Ensembl: ENSSSCG00000016698
UniProt: F1SHT7 A0A8D0NE02
Position
18:45388523..45392190
AA seq 317 aa
MMDFDERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYSYSSNLPQVQPVRE
VTFREYAIEPATKWHPRGNLAHCYSAEELVHRDCLQAPSAAGVPGDVLAKSSANVYHHPT
PAVSSNFYSTVGRNGVLPQAFDQFFETAYGTPENLASSDYPGDKSTEKGAPAAAATSAAA
AAAAAAAATGTPATSSSDSGAGGCREAAAAAEEKERRRRPESSSSPESSSGHTEDKAGGS
SGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKE
KKINRDRLQYYSANPLL
NT seq 954 nt   +upstreamnt  +downstreamnt
atgatggattttgatgagcgtggtccctgctcctctaacatgtatttgccaagttgtact
tactacgtctcgggtccagatttctccagcctcccttcttttctgccccagaccccgtct
tcgcgcccaatgacatactcctactcttccaacctgccccaggtccaacccgtgcgcgaa
gtgaccttcagagaatacgccattgagcccgccactaaatggcacccccgcggcaatctg
gcccactgctactccgcggaggagctcgtgcacagagactgcctgcaggcgcccagcgcg
gccggcgtgcctggcgacgtgctggccaagagctcggccaacgtctaccaccaccccacc
cccgccgtctcgtccaatttctatagcaccgtgggcagaaacggcgtcctgccccaggct
ttcgaccagtttttcgagacggcctacggcaccccggaaaacctcgcctcctccgactac
cccggggacaagagcaccgagaagggggccccggcggccgcggcgacctccgcggcggcg
gcggcggcggcggcggcagcggccacgggcacgccggcaacttcaagttcggacagcggc
gccggcggctgccgggaggcggcggcggcggcggaggaaaaggagcggcggcggcgcccc
gagagcagcagcagccccgagtcgtcttccggccacactgaggacaaggccggcggctcc
agtggccagcgaacccgaaaaaagcgctgcccctacaccaagtaccagatccgggagctg
gagcgggagttcttcttcagtgtgtacatcaacaaagagaagcgcctgcagctgtctcgc
atgctcaacctcaccgaccgtcaagtcaaaatctggtttcagaacaggagaatgaaggaa
aaaaaaattaacagagaccgtttacagtactactcagccaacccactcctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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