KEGG   Sus scrofa (pig): 100522004
Entry
100522004         CDS       T01009                                 
Symbol
SF3B2
Name
(RefSeq) splicing factor 3B subunit 2 isoform X2
  KO
K12829  splicing factor 3B subunit 2
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100522004 (SF3B2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    100522004 (SF3B2)
Spliceosome [BR:ssc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100522004 (SF3B2)
 Complex B
    100522004 (SF3B2)
 Complex C
   U2 SnRNP specific factors
    100522004 (SF3B2)
SSDB
Motif
Pfam: DUF382 PSP SAP
Other DBs
NCBI-GeneID: 100522004
NCBI-ProteinID: XP_003122553
Ensembl: ENSSSCG00000012957
UniProt: F1RU38 A0A8D0TDS8
Position
2:complement(6279039..6295550)
AA seq 895 aa
MAAEHPEPPKGELQLPPPPPPGHYGAWAAQELQAKLAEIGAPIQGSREELVERLQTYTRQ
TGIVLSRPVLRGEDGDKAAPPPMSAQLSGIPMPPPPMGLPPLQPPPPPPPPPPGLGLGFP
MAVGPRPPNLGPPPPLRVGEPVALSEEERLKLAQQQAALLMQQEERAKQQGDHSLKEHEL
LEQQKRAAVLLEQERQQEIAKMGTPVPRPPQDLGQIGVRPPLGARVAAPVGPTPTVLPMG
APVPRPRGPPPPPGDENREMDDPSVGPKIPQALEKILQLKESRQEEMNSQQDEEEMETDT
RSSLGPSASETEEDSVSVSKKEKNRKRRNRKKKKKPQRVRGLSSESSGDREKESSRSRGS
DSPAADVEIEYVTEEPEIYEPNFIFFKRIFEAFKLTDDVKKEKEKEPEKLDKLENSAVPK
KKGFEEEHKDSDDDSSDDEQEKKPEAPKLSKKKLRRMNRFTVAELKQLVARPDVVEMHDV
TAQDPKLLVHLKATRNSVPVPRHWCFKRKYLQGKRGIEKPPFELPDFIKRTGIQEMREAL
QEKEEQKTMKSKMREKVRPKMGKIDIDYQKLHDAFFKWQTKPKLTIHGDLYYEGKEFETR
LKEKKPGDLSDELRISLGMPVGPNAHKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPES
CSFGYHAGGWGKPPVDETGKPLYGDVFGTNAAEFQTKTEEEEIDRTPWGELEPSDEESSE
EEEEEESDEDKPDETGFITPADSGLITPGGFSSVPAGMETPELIELRKKKIEEAMDGSET
PQLFTVLPEKRTATVGGAMMGSTHIYDMSTVMSRKGPAPELQGVEVALAPEELELDPMAM
TQKYEEHVREQQAQVEKEDFSDMVAEHAAKQKQKKRKAQPQDSRGGSKKYKEFKF
NT seq 2688 nt   +upstreamnt  +downstreamnt
atggcggccgagcatcccgagcctccgaaaggagagttgcagctgccgccgccgccgcct
cctgggcattatggtgcctgggctgctcaggagcttcaggccaaattagcggagatcggc
gctccaatccaggggagtcgcgaggagctggtggaaaggctgcagacctacacccgccag
actggcatcgtcctgagtcggcctgttctgagaggtgaagatggggacaaagctgctccc
cctcctatgtcagcccagctctctgggattcccatgccacccccgcccatgggactcccc
cctctacagcctcctccaccacccccaccacctccacctggccttggccttggctttccc
atggcagttggaccccgccctccaaacttgggcccccctcctcctctccgagtgggtgaa
cctgtggcactgtccgaggaagagcggttaaagctggcgcagcagcaggcggcattgctg
atgcagcaagaggaacgtgccaagcagcagggggatcattcactgaaggaacatgagctt
ttggagcagcagaagcgggcagccgtgttactggagcaggaacggcagcaggagattgcc
aagatgggcaccccagtccctcggcccccacaggacttgggccagattggtgttcgccct
cctctgggtgctcgagtagctgccccggtgggccccactcccactgttttgcctatgggg
gcccctgttcctcggcctcgtggtcccccaccaccccctggagatgagaacagagagatg
gacgacccctctgtgggccccaagatcccccaggctttggaaaagatcctgcagctgaag
gagagccgccaggaagagatgaactctcagcaggacgaggaggagatggaaacagacacg
cgctcgtccctgggcccgtcggcgtcagagaccgaggaggacagcgtgtccgtgtccaaa
aaagagaaaaaccggaagcgtcggaaccgaaagaagaagaaaaagccccagcgggtgcgg
gggctgtcgtcggagagctccggggaccgagagaaggagtccagccggtcccgtggctcc
gactcgcccgcggccgatgttgaaattgagtacgtgaccgaagagcctgaaatttacgag
cccaacttcatcttcttcaagaggatctttgaggctttcaagctcaccgatgacgtgaag
aaggagaaagagaaggagccagagaagctcgacaaactggagaactctgcggtgcccaag
aagaagggctttgaggaggagcacaaggacagcgacgatgacagcagcgatgacgaacag
gagaagaagccagaagcccctaagttgtccaagaagaagctgcgcagaatgaatcgcttc
actgtggctgaactcaagcagcttgtggctcggcctgatgttgtggagatgcatgacgtg
acggcccaggaccccaagctcttggttcacctcaaggccacgcggaattctgtgcctgtg
ccccgccactggtgttttaagcgcaagtacctgcagggcaaacgaggcatcgagaagccc
cccttcgagctgccagatttcatcaaacgcacaggcatccaggagatgcgggaggccctg
caggagaaggaggagcagaagaccatgaagtccaagatgcgagagaaggtccggcccaag
atgggcaagatcgacatcgactaccagaagctgcacgacgccttcttcaagtggcagacc
aagcccaagctgaccatccacggggacctgtactacgaggggaaggagtttgagacacgg
ctgaaggagaagaagccaggcgatttgtctgatgagctgcggatttccttggggatgcca
gtaggaccaaacgcacacaaggtccctcccccgtggctgatcgccatgcagcgctacggg
ccgcccccgtcgtaccccaacctgaagatcccggggctgaactcgcccatccccgagagc
tgttccttcgggtaccatgctggtggctggggcaaacccccagtcgatgagaccgggaaa
cccctctatggggatgtgtttggaaccaatgctgctgaatttcagaccaagactgaggaa
gaggagattgatcggaccccttggggggagctggagccgtcggatgaagaatcttcagaa
gaagaggaagaggaggagagcgatgaagacaagccggatgagacaggcttcatcacccct
gcagacagcggcctcatcactcccggaggcttctcgtccgtgccggcaggaatggagacc
cctgaactcattgagctgaggaagaagaagattgaggaggcgatggacggaagtgagaca
ccgcagctcttcactgtgttgccggagaagagaacagccaccgttggaggggccatgatg
ggatcgacccacatctatgacatgtccacggttatgagccggaagggcccagcccccgag
ctgcaaggtgtggaagtggccctggcacccgaagagttggagctggatcccatggccatg
acccagaagtatgaggagcacgtgcgggagcagcaggcccaagtggagaaagaggacttc
agcgacatggtggctgagcatgctgccaagcagaagcaaaagaaacggaaagctcagccc
caggacagccgtgggggcagcaagaaatataaggagttcaaattttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system