KEGG   Sus scrofa (pig): 100522496
Entry
100522496         CDS       T01009                                 
Symbol
MYOM1
Name
(RefSeq) myomesin-1 isoform X2
  KO
K24495  myomesin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100522496 (MYOM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ssc04990]
    100522496 (MYOM1)
Domain-containing proteins not elsewhere classified [BR:ssc04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   100522496 (MYOM1)
SSDB
Motif
Pfam: fn3 I-set Ig_3 Ig_2 ig V-set Pur_ac_phosph_N Tissue_fac C2-set_2 Ig_6
Other DBs
NCBI-GeneID: 100522496
NCBI-ProteinID: XP_003127892
Ensembl: ENSSSCG00000003693
UniProt: A0A8D0RH22 A0A480KXA1
Position
6:103451206..103593093
AA seq 1656 aa
MMSLPFYQKLHQHYDRSYRNKDLRTTMSQYQQEKRSSAIYTHGSTAYSARSSAAHRQESE
AFSQASTTSYQQQASRASELALSSSVSQKAASAYNYGYSRGRTDSSLMLEDYSSKLSPQI
KRARKGLLSGEEKENLPSDYMVPIFSGRQVHVSGITDTEEERIKEAAAYIAKRKLLASEE
GITAAKQSTVSKQSTSTLHQEEAFEKKSRKVAIREKAEHLELRKTLEETEAYHRKLNEDN
LLHAPEFVIKPRSHTVWEKENVKLHCSVAGWPEPRVTWYKNQVPINVHANPGKYIIESRY
GMHTLEINACDFEDTAQYRASAMNVKGELSAYASVVVKRYKGEFDETRFHAGVSTLPLSF
AVTPYGYASKFEIHFDDKFDVSFGREGETMSLGCRVVITPDIKHFQPEVQWYRNGAPVSP
SKWVQTHWSGDRATLTFSHLNKEDEGLYTIRVRMGDYYEQYSAYVFVRDADAEIEGAPAS
PLDVVCLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTNNWSQCNDTPVKFARFPVT
GLIEGRSYIFRVRAVNKNGIGLPSRVSEPVAALDPAEKARLRSRPSAPWTGQIIVTEEEP
TEGIVPGPPTDLSVIEATQSYVVLSWKPPKQRGHEGILYFIEKCDAGAENWQRVNTELPV
KSPRFALFDLAEGKSYQFRVRCSNSAGVGEPSEATEVTVVGDKLDIPKAPSNIIPSRNTD
TSVVVTWEESKDAKELVGYYIESSVVGSGKWEPCNNNPVKGTRFTCHGLTTGQSYIFRVR
AVNAAGLSEYSQDSEAIEVKAAIGGAVSPAVWPELSDTPGGLTDFRGGMHDTSQPTFKKD
ALLGSKLNKASLPSSSHNLGQTEVRKVSETVQEELSPPPQKAAVKGKSKSDPLKKKKDLA
APSPPCDITCLESFRDSMVLGWKQPDKTGGAEITGYYVNYREVIDGVPGRWREANIKAIS
DEAYKISNLKENMVYQFQVAAMNIAGLGEPSAVSASFKCEEWTIAVPGPPHSLKYSEVRN
TSLVLQWKPPIHSGRTPVTGYFVDMKEANAKEDHWRGLNEAALKNTYLKVQGLKEGVSYV
FRVRAINQAGVGKPSDLAGPVVAETRPGTKEVVVSVDDDGIISLNFECDQMAPNSEFTWS
KDYVPTEDSPRLEVESKGNKTKMTFKDLGVEDLGIYSCDVTETDGIAASYLIDEEELKRL
LALSQEHKFPTVPIKSELAVEILEKGQVRFWMQAEKLSGNAKVNFIFNDKEIFEGPKYKM
HIDRNTGMIEMFMEKLQDEDEGTYTFQVQDGRATGHSTLVLIGDVYKKLQKEAEFQRQEW
IRKQGPHFAEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICT
LLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMTEVCKTIALSATDLKIQSTA
EGIRLYSFVTYYVDDLKVNWSHNGAAIKYTDRVKSGVTGEQIWLQINEPTPNDKGKYVME
LFDGKTGHQKMVDLSGQAYEEAFAEFQRLKQAAIAEKNRARVVGGLPDVVTIQEGKALNL
TCIVWGDPTPEVSWLKNEKLLASDEHCNLRFEAGKTAYFTISGVRTSDSGRYGLVVKNKY
GSETSDFTVSVFIPEEEARQGVEEPPKGHKGNKKSP
NT seq 4971 nt   +upstreamnt  +downstreamnt
atgatgtctctgccgttttatcagaaacttcaccagcactatgaccgcagctacagaaac
aaggaccttcgcaccaccatgagccagtaccagcaggaaaagagaagctccgccatctac
acccatggctccaccgcctacagcgcccgctcctccgctgcccaccgccaggagtccgag
gccttcagccaggcatccaccacctcttaccagcagcaggcctcccgggcctctgagttg
gctctctcgtcctcggtcagtcagaaggcggcctcagcctacaattacggctactcccga
ggacgtacagattccagtttgatgttagaagattattcatccaagttgagccctcaaata
aaaagagccaggaagggccttctctctggagaagagaaagaaaatcttccaagtgactat
atggtgcccattttctcaggacgccaagtgcatgtcagtgggattacagacacagaagaa
gaaagaattaaagaagctgctgcttatatagctaagaggaaactccttgctagtgaagaa
ggaatcacagcagccaaacagtccacagtatccaaacagtctacatccacacttcaccaa
gaggaagcttttgagaagaagtcaaggaaagttgcaattcgagaaaaggcggaacacctg
gagctgagaaaaacattagaagaaactgaggcatatcatcgaaagttgaatgaagataat
cttctccatgctcctgaatttgtcattaaacctcgttcccacactgtttgggagaaagaa
aatgtaaaactacactgctctgtagctggctggccagaacctcgtgtcacatggtacaaa
aaccaggtgccaataaacgtccatgcaaaccctgggaagtatattattgaaagccgatat
ggaatgcacactctggagataaatgcatgtgactttgaagacaccgcccagtaccgggcc
tcggcgatgaatgttaaaggagagctttcagcgtatgcttcggttgtggtaaagagatat
aaaggagagtttgacgagactcgctttcatgcaggggtttccaccttgcccctcagcttt
gccgtgaccccttatggttatgcatccaagtttgagatccactttgatgacaagtttgat
gtgtcttttgggagagagggcgagacgatgagtctaggctgccgtgtagttatcactcct
gatattaaacatttccagccggaggtccagtggtacagaaatggagcacctgtttctcca
tcaaaatgggtacaaacacactggagtggagatcgggcgacactaacattttctcatctc
aacaaagaagacgaaggtctctacacaatccgtgtacgaatgggagactattatgaacaa
tatagtgcttatgtctttgttcgagatgctgatgcggagattgaaggagctccagcctct
cccttggacgtggtgtgcttggatgccaataaagattacatcatcatctcttggaaacag
ccagctgtggatggagggagtcctattctgggatatttcatcgataagtgtgaggtgggc
acaaataactggtcgcagtgcaatgacactcctgtgaagtttgctcgtttcccggtcact
ggattgatagaaggtcgttcttacatattccgagttcgagccgtgaacaaaaatggaata
ggtctaccctctcgagtttctgagcctgtggctgctctggatccagctgagaaagctaga
cttagaagtcgcccctcagcaccctggactggacagatcattgtcacagaggaggaaccg
acagagggtattgttcccgggccccccacagacctctctgtcatcgaggccacccagagc
tacgtggtgttgagctggaagccccctaagcagcgtggccatgagggtatcctgtacttt
atagaaaagtgtgatgcaggtgcggaaaactggcagcgggtgaacacagagctccctgtc
aagtctccccgctttgctctgttcgacttggctgaggggaagtcctaccagttccgagtc
cgctgttctaattccgcgggagtgggtgagccctcagaggcaacggaagtgaccgtagta
ggggacaaacttgacatccccaaggccccgagcaacatcatcccaagcagaaatacagac
acatcagtggtcgttacgtgggaggaatccaaggatgctaaagagctggtcgggtactac
atagagtcaagcgttgttggctctggcaagtgggagccctgcaacaacaaccctgtgaag
ggcacacgattcacttgtcatggattgactactggtcagagttatattttccgggtcaga
gcagttaatgcagctggacttagtgaatattcgcaggattcagaagcaatcgaagtaaaa
gctgctattgggggcgcagtgtctccagctgtgtggcctgaactgagtgatacacctgga
ggactaacagacttcaggggaggcatgcatgacacctcccagccaacctttaagaaagat
gctttgcttggtagcaaacttaacaaagcttcactacccagtagctctcacaacctgggc
caaacggaagtgaggaaagtaagtgaaacagttcaggaagagctttccccaccaccacag
aaggcagctgttaaggggaaaagtaagtctgaccctctgaaaaagaagaaggatctagcg
gcaccatctccaccctgtgatatcacttgtcttgaaagttttcgtgactcaatggttctt
ggatggaagcaaccggataagacgggaggggctgaaattacaggctattacgtgaactat
cgtgaagtaattgatggggtcccgggaagatggagagaagccaacatcaaagctatcagt
gatgaggcgtataagattagcaacctgaaggaaaacatggtgtatcagttccaagtggca
gccatgaacatcgctgggttgggagagccctcggcagtgagcgcaagcttcaaatgtgaa
gagtggaccattgctgttccaggaccaccacacagcctcaagtatagtgaagtcaggaat
acgtccctggttctgcagtggaagcctcccatccactcaggacggacccccgtcactggc
tactttgtggacatgaaggaagccaatgccaaagaggaccactggcgaggacttaatgag
gcggctcttaaaaacacgtacctgaaggtgcaaggcctcaaggagggtgtcagctacgtg
ttccgcgtccgagccataaaccaggcaggtgttggaaagccgtctgacctggctgggcct
gttgtggcagaaactcgtccaggaaccaaggaggttgtcgtaagtgtggatgatgatgga
atcatttccttgaactttgaatgcgatcagatggctccaaattctgagttcacctggtcc
aaagattacgtacccacagaggactcaccacgattagaggtggaaagcaaaggcaacaag
acgaaaatgaccttcaaagaccttggggtagaagacttgggcatttactcctgtgatgtg
acggaaactgatgggatagcggcaagctacttgatagatgaggaagaattgaagcgtcta
cttgctctcagccaagaacacaagttcccaactgtcccaattaaatcagagttagcagtt
gaaattttggagaaaggccaggtccggttttggatgcaggctgagaagctgtctggcaat
gccaaagtcaacttcatatttaatgacaaggaaatattcgaagggccgaaatataagatg
catattgaccgaaacaccggcatgattgaaatgtttatggaaaagctacaggatgaggat
gaggggacatatactttccaagttcaagatggaagagcaactggccattccactcttgtt
ctcattggcgatgtctataaaaagctccagaaagaagctgaattccagcggcaagaatgg
atcaggaaacaaggtccacatttcgctgagtatttgagctgggaagtgactggtgaatgt
aatgtgctattgaaatgcaaggtggcaaatattaagaaagagactcatattgtgtggtac
aaagatgagagggaaatatcagtggatgaaaagcatgactttaaggatggtatatgtacc
ctccttataacagagttttccaagaaagatgctgggatctatgaagttatcctgaaggac
gacagaggaaaagacaagagcagactgaagctcgtggatgaagcctttaaagaactgatg
actgaagtatgtaaaacaattgctctgtctgctactgacctgaagatacagagcacagct
gagggcattcggctgtactcttttgtcacttactatgtggatgatctaaaagttaactgg
tcccacaatggggccgctattaagtacacagacagagttaagagtggggtcaccggggag
cagatttggctgcagatcaacgaacccactccaaatgacaaagggaagtacgtgatggag
ctctttgatggcaaaactggacaccagaagatggtggacctttctggacaagcatacgag
gaagcctttgctgaattccagagattaaaacaagctgccattgccgagaaaaatcgtgct
cgggtggtgggcggtctccccgacgtggtcaccatccaggagggcaaggcgcttaatctc
acatgcatcgtatggggcgacccgactccggaggtgtcctggctgaagaacgagaagctc
ctggcctcggacgagcactgcaacctcaggttcgaggccggcaagaccgcctacttcacc
atcagcggggtgaggacctccgactcgggcaggtatgggctggtcgtgaagaacaagtac
ggctcggagaccagcgacttcaccgtcagtgtgttcatcccagaggaggaggcgcggcag
ggggtcgaggagcccccaaagggccacaagggcaacaagaagtccccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (37)   

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