KEGG   Sus scrofa (pig): 100523741
Entry
100523741         CDS       T01009                                 
Symbol
SMG9
Name
(RefSeq) protein SMG9 isoform X2
  KO
K18735  protein SMG9
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100523741 (SMG9)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     100523741 (SMG9)
SSDB
Motif
Pfam: Smg8_Smg9 AAA_30 DUF6079
Other DBs
NCBI-GeneID: 100523741
NCBI-ProteinID: XP_005655993
Ensembl: ENSSSCG00000003068
UniProt: A0A8D1RV96 F1RMV1
Position
6:complement(50550743..50569753)
AA seq 520 aa
MSESGHSQPGLYGMERRRRWKEPGPGGPQNLSGPGGRERDYIAPWERERRDGSEEPGTAV
MQKTPIILSKPPAERSKQPAPPAAPAAPPAPAPLEKPIVLMKPREEGKGPAASTPASTPE
GTTPPPPAAPTPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDSEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYQGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgtctgagtctgggcacagtcagcctgggctctacggcatggagaggcggcggcggtgg
aaggagccaggccctggcggcccccagaatctctcggggcctggcggtcgggagagggac
tacatcgccccctgggaaagagagagacgggatggcagcgaagagccgggcacggccgtc
atgcagaaaacgcccatcatcctctcaaagcctccagcagagcggtcaaagcagccggcg
cccccagcagcccctgccgccccgcctgctccggcccctcttgagaagcccatcgtcctc
atgaaaccacgggaggaggggaaagggcccgcggcctcgacccccgcctcaacccccgag
ggcaccaccccacccccgcctgcggcccccacgccgcccaagggcgagaaggaagggcag
cggcccacacagcctgtgtaccagatccaaaaccggggcatgggcactgccgcgccagca
gccatggaccccgtcgtgggccaggccaagctgctccccccggaacgcatgaagcacagc
atcaagttggtggatgaccagatgaattggtgcgacagcgccattgagtacctgttggat
cagaccgatgtgctggtggtcggtgtcctgggcctccaggggacaggcaagtccatggtc
atgtcgttgttgtcagccaacactcctgaagaggaccagagggcgtatgttttccgggcc
cagagcgctgaaatgaaggagcgagggggcaaccagaccagtggcatcgacttcttcatt
acccaagagcggatcgtcttcctggacacacagcccatcctcagcccctccatcctggac
cacctcatcaacaacgaccgcaagctgcctcctgagtacaacctgccccacacctacgtg
gagatgcagtcgctccagatcgctgccttcctcttcaccgtgtgccacgtggtgattgtc
gtccaggactggttcacggacctcagtctgtataggttcctgcagacggcagagatggtg
aagccctccaccccatcccccagccacgagtccagcagctcttcaggctccgatgaaggc
accgagtactacccccacctggtcttcctgcagaacaaagctcgcagggaggacttctgc
ccccggaagctgcggcagatgcacctgatgatcgaccagctcatggcccactcccacctg
cgttacaagggtacactgtccatgttacagtgcaacgtcttccctgggctcccgccggac
ttcctggactccgaggtcaacctcttcctggtgcccttcatggacagcgaggccgaaagt
gaaaaccccccaagagcaggacccgggtccagcccgctcttctcgctcctccccgggtac
cagggccaccccagtttccagtccttggtgagcaagctccggagccaggtgatgtccatg
gcccggccacagctgtcgcacaccatcctcaccgagaagaactggttccactatgccgcc
cgcatctgggacggggtgaagaagtcatccgccctggcagagtacagccgcctgctggcc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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